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The map label for this gene is sca3

Identifier: 229586736

GI number: 229586736

Start: 617283

End: 617813

Strand: Direct

Name: sca3

Synonym: RAF_ORF0585

Alternate gene names: NA

Gene position: 617283-617813 (Clockwise)

Preceding gene: 229586735

Following gene: 229586738

Centisome position: 48.28

GC content: 30.51

Gene sequence:

>531_bases
TTGGCAACACTTAATTCTACAATATTAAAAGCTACTAATATTAATTTACAAAGTAATACGTCCGTACTTAATTTAGATGA
CGACATAACGGTTACGGGTAATATAGACGGTGCTAAAGGAGTAAACGGAAATTTTATAGGGAATGCTATACTTAACGGAA
ATATAAATAATTTCAATATACTTCAGTGTAATGGAGGTAACGGTAAGATTCTTGATTTACAAGGTAATACTACGGTAAAT
AGTATTGTTTTTGCAGATAGTGTTTTAGCTGCGGGAACTATAAGTGTTAACAGTCTATTAGATGTAGGAGGTATTACTTT
TAATAATAGTAATGCTAGCGGCGGTACTTTAATAATAAATACCGAAAATACAATTAATGTTGCATTATTAAACGCTATAC
AAGCAAAAATACAAATAAATGCTAATTTAACCAATGATCCAAGTGCCGGAGATATAGGTGATATTAGAATAGCGGATAAT
ACAACATATACAATAGATGCAGCAAATGGGAATGTAAATTTGCTCAAATAA

Upstream 100 bases:

>100_bases
AGGGATACTAAATCCAGCTCATGATCTTGGTAGTAGTAACATAATAACAGGCGATATAGGTAATATAGGCTCACTAGCCG
CAGTAAATGTTTTACTTGGG

Downstream 100 bases:

>100_bases
TAATTTAAACAAATCTGGCAATGATGAATATGGAATAGTGAGAATAGGAGCAATCACAAAATACCTAACCATAGCAAATA
ACGGTGGACCTTATACTATA

Product: Cell surface antigen Sca3

Products: NA

Alternate protein names: Cell Surface Antigen-Like

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MATLNSTILKATNINLQSNTSVLNLDDDITVTGNIDGAKGVNGNFIGNAILNGNINNFNILQCNGGNGKILDLQGNTTVN
SIVFADSVLAAGTISVNSLLDVGGITFNNSNASGGTLIINTENTINVALLNAIQAKIQINANLTNDPSAGDIGDIRIADN
TTYTIDAANGNVNLLK

Sequences:

>Translated_176_residues
MATLNSTILKATNINLQSNTSVLNLDDDITVTGNIDGAKGVNGNFIGNAILNGNINNFNILQCNGGNGKILDLQGNTTVN
SIVFADSVLAAGTISVNSLLDVGGITFNNSNASGGTLIINTENTINVALLNAIQAKIQINANLTNDPSAGDIGDIRIADN
TTYTIDAANGNVNLLK
>Mature_175_residues
ATLNSTILKATNINLQSNTSVLNLDDDITVTGNIDGAKGVNGNFIGNAILNGNINNFNILQCNGGNGKILDLQGNTTVNS
IVFADSVLAAGTISVNSLLDVGGITFNNSNASGGTLIINTENTINVALLNAIQAKIQINANLTNDPSAGDIGDIRIADNT
TYTIDAANGNVNLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18086; Mature: 17955

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLNSTILKATNINLQSNTSVLNLDDDITVTGNIDGAKGVNGNFIGNAILNGNINNFNI
CCCCCCEEEEEEECCEECCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEE
LQCNGGNGKILDLQGNTTVNSIVFADSVLAAGTISVNSLLDVGGITFNNSNASGGTLIIN
EEEECCCCEEEEEECCCEEEEEEEECCEEEECEEEECCEEEECCEEECCCCCCCCEEEEE
TENTINVALLNAIQAKIQINANLTNDPSAGDIGDIRIADNTTYTIDAANGNVNLLK
CCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCEEEEC
>Mature Secondary Structure 
ATLNSTILKATNINLQSNTSVLNLDDDITVTGNIDGAKGVNGNFIGNAILNGNINNFNI
CCCCCEEEEEEECCEECCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEE
LQCNGGNGKILDLQGNTTVNSIVFADSVLAAGTISVNSLLDVGGITFNNSNASGGTLIIN
EEEECCCCEEEEEECCCEEEEEEEECCEEEECEEEECCEEEECCEEECCCCCCCCEEEEE
TENTINVALLNAIQAKIQINANLTNDPSAGDIGDIRIADNTTYTIDAANGNVNLLK
CCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA