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The map label for this gene is 229586720

Identifier: 229586720

GI number: 229586720

Start: 595041

End: 595562

Strand: Direct

Name: 229586720

Synonym: RAF_ORF0569

Alternate gene names: NA

Gene position: 595041-595562 (Clockwise)

Preceding gene: 229586709

Following gene: 229586721

Centisome position: 46.54

GC content: 27.2

Gene sequence:

>522_bases
ATGAAAAAGCAAATTATTTATCCTGATTTTATAGCACGAATTTTTTCTACGGCACTTGATTTATCAGTATTTGCCTTTAT
AGCAATCCCAATATCACAATTTTGTTCTTTTAATTTATTATGGTTGTTCTTTAATGATTACTTCCTTAGCAATAACATTA
ATCTTTATAATCCCAATGAAATGTTTAACTCGGTTATGAGTCAGGAATTTTATGAATATCTTAAAGCAGGAAATTTTAAT
AAATATATTTTGTTTAATATTTCAATTTTTGCTACTAATATATTAGTAATAGGCTCATATTTCATAACGCTTTGGTATTA
TAAAGGTGCAACGCTTAGTAAAATGTTTTTACGTATGAAAATCGTAGATGCCGTAACATTAAATCGTCCGACCTTAAAGC
AGTTAATTAAAAGATTTTTAGGGTATATGACTTTTCCTATCGGTATTTTTTTCATACTTTTTTCTTCTAAAAAACAAGCA
TTACATGATAAGATAGCCGGAACCGTCGTTATTAAGTCTTAA

Upstream 100 bases:

>100_bases
TTGCGAGGAAAAACTGTAAGTTTTGACGAAGCAATCTCATGCCAAAATCCTGAGATTGCCATAACCCTTACTATCTAACA
CCAAAATAAAGTAACTGGCA

Downstream 100 bases:

>100_bases
ATATACTCCTAAGTAATAGACGAAGTTTAATTTGGAAAAGAGCAAGGAGTATATAAGGCGAGGAGCGGAGCATATACACT
TAATAGGTGAGTACCGCAGT

Product: RDD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKQIIYPDFIARIFSTALDLSVFAFIAIPISQFCSFNLLWLFFNDYFLSNNINLYNPNEMFNSVMSQEFYEYLKAGNFN
KYILFNISIFATNILVIGSYFITLWYYKGATLSKMFLRMKIVDAVTLNRPTLKQLIKRFLGYMTFPIGIFFILFSSKKQA
LHDKIAGTVVIKS

Sequences:

>Translated_173_residues
MKKQIIYPDFIARIFSTALDLSVFAFIAIPISQFCSFNLLWLFFNDYFLSNNINLYNPNEMFNSVMSQEFYEYLKAGNFN
KYILFNISIFATNILVIGSYFITLWYYKGATLSKMFLRMKIVDAVTLNRPTLKQLIKRFLGYMTFPIGIFFILFSSKKQA
LHDKIAGTVVIKS
>Mature_173_residues
MKKQIIYPDFIARIFSTALDLSVFAFIAIPISQFCSFNLLWLFFNDYFLSNNINLYNPNEMFNSVMSQEFYEYLKAGNFN
KYILFNISIFATNILVIGSYFITLWYYKGATLSKMFLRMKIVDAVTLNRPTLKQLIKRFLGYMTFPIGIFFILFSSKKQA
LHDKIAGTVVIKS

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010432 [H]

Pfam domain/function: PF06271 RDD [H]

EC number: NA

Molecular weight: Translated: 20218; Mature: 20218

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQIIYPDFIARIFSTALDLSVFAFIAIPISQFCSFNLLWLFFNDYFLSNNINLYNPNE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEHHHHHEECCCCEECHHH
MFNSVMSQEFYEYLKAGNFNKYILFNISIFATNILVIGSYFITLWYYKGATLSKMFLRMK
HHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVDAVTLNRPTLKQLIKRFLGYMTFPIGIFFILFSSKKQALHDKIAGTVVIKS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MKKQIIYPDFIARIFSTALDLSVFAFIAIPISQFCSFNLLWLFFNDYFLSNNINLYNPNE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEHHHHHEECCCCEECHHH
MFNSVMSQEFYEYLKAGNFNKYILFNISIFATNILVIGSYFITLWYYKGATLSKMFLRMK
HHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVDAVTLNRPTLKQLIKRFLGYMTFPIGIFFILFSSKKQALHDKIAGTVVIKS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]