| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is ampG4 [H]
Identifier: 229586660
GI number: 229586660
Start: 527089
End: 528333
Strand: Direct
Name: ampG4 [H]
Synonym: RAF_ORF0497
Alternate gene names: 229586660
Gene position: 527089-528333 (Clockwise)
Preceding gene: 229586659
Following gene: 229586661
Centisome position: 41.23
GC content: 33.17
Gene sequence:
>1245_bases ATGCGCATTACCAAGATTTTTAAAGATTATCGATTATTTGAAATATTTATTTTAGGAATAGTTAGCGGTATGCCGCTGGT TATAATTTTTTCTACTCTTGCGGTATGGTTAAAAGAATCTGGTATAGATATCGCCGTTATTACTACTTTTGCGGTTGCAA GGTTATCATATTCGTTAAAAGTATTTTGGTCGCCTCTAGTCGACAATTTTAAAATACCTTTTTTAAGTAGGTGGGGACAT CGCAAAAGCTGGCTTATATTATGTAGCTCTTTAATGGCTTTAGTACTAATTGCTATGAGCAAGGAAAATCCTGAAGTTTC TTTAACTTTTTTCTATTTTTTGACTATATTATTAGGCTTTTTATCTAGCACGTTTGATATTGCAGTTGATGCGTTGCGTA TAGATAAGTTTGATCAAGAAACACAAAGCATAGCTAGTGCAACCGCTGTATTCGGTTATCGAATCGGTATGCTTATTACA GGGGCAGGTGCTTTGTACCTTGCAGAAATAACTGGAAATAATTGGCAACTAACTTTTTGTGTTATAGCTATAATATTTGT CGTTGTAACGATATTTATAATAACCGTAAACGAAAAAGAATTAGTAAGAGAAAAAATATTAATTTTTTCTCTTACTTCAT GGATTTCTACAGTAATTAATCCTTTCAAGGATTTTTTCAAAAGAGAATTTGCTGCAACTATTTTACTTGCGGTAATATTT TTTAAATTAGGCGATGCTATGCTTGGAGCGGTTGCCTCACCTTTTTATATAGAGCTTGGTTATACAAAAGGCGAAATAGC AATAATAGCTAAACTTTATGGATTGATTGCAACCTTAGTCGGCGGTTTTGTCGGTGGTATTGTAATGTATAGGGTGGGGA ATTTTAAAGGTTTGATTATTACCGGTATTGCCCAAAGCTTAACGCATTTTGCATTTATTTGGCTTAACCATCAGCCTCCT TCTTTTGAAGCTTTATTAATTGCTATTACTATAGAGAATTTTGCTGCCGCTATGGGTGCTACTGCTTTAGTCGGATATAT AGGTAATTTATGTAATAAAAAATATTCCGCAACACAATATGCTTTACTTAGTAGTGCTAGTAGTTTATGTAACAATACTG TCACTATTTATGCTGGAAAACTCGTAAATATGATGGGATGGGACGGTTTTTTCCTCTTTACTATAATTTTAGCCTTGCCT GCTTTGTTTATATTCATGTATCTTAATAAAAAGGTTAATGTGTAG
Upstream 100 bases:
>100_bases TCCAGTAAAAAATGCATAGCATTTTTTTATTATTTGCCTAGATTGTCATCACGTTGGGACTATGTCCCTCCTCGCAATGA CGATTTAATGAAATATCACA
Downstream 100 bases:
>100_bases TAAGTATTATTTTCATTGTCATTGCGAGCGACCGTAGGAAGCGTGACAATCTAGGAAAATAATAAGAAAATGCATAGCAT TTTTTACTGGATTGCTTCGT
Product: AmpG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRITKIFKDYRLFEIFILGIVSGMPLVIIFSTLAVWLKESGIDIAVITTFAVARLSYSLKVFWSPLVDNFKIPFLSRWGH RKSWLILCSSLMALVLIAMSKENPEVSLTFFYFLTILLGFLSSTFDIAVDALRIDKFDQETQSIASATAVFGYRIGMLIT GAGALYLAEITGNNWQLTFCVIAIIFVVVTIFIITVNEKELVREKILIFSLTSWISTVINPFKDFFKREFAATILLAVIF FKLGDAMLGAVASPFYIELGYTKGEIAIIAKLYGLIATLVGGFVGGIVMYRVGNFKGLIITGIAQSLTHFAFIWLNHQPP SFEALLIAITIENFAAAMGATALVGYIGNLCNKKYSATQYALLSSASSLCNNTVTIYAGKLVNMMGWDGFFLFTIILALP ALFIFMYLNKKVNV
Sequences:
>Translated_414_residues MRITKIFKDYRLFEIFILGIVSGMPLVIIFSTLAVWLKESGIDIAVITTFAVARLSYSLKVFWSPLVDNFKIPFLSRWGH RKSWLILCSSLMALVLIAMSKENPEVSLTFFYFLTILLGFLSSTFDIAVDALRIDKFDQETQSIASATAVFGYRIGMLIT GAGALYLAEITGNNWQLTFCVIAIIFVVVTIFIITVNEKELVREKILIFSLTSWISTVINPFKDFFKREFAATILLAVIF FKLGDAMLGAVASPFYIELGYTKGEIAIIAKLYGLIATLVGGFVGGIVMYRVGNFKGLIITGIAQSLTHFAFIWLNHQPP SFEALLIAITIENFAAAMGATALVGYIGNLCNKKYSATQYALLSSASSLCNNTVTIYAGKLVNMMGWDGFFLFTIILALP ALFIFMYLNKKVNV >Mature_414_residues MRITKIFKDYRLFEIFILGIVSGMPLVIIFSTLAVWLKESGIDIAVITTFAVARLSYSLKVFWSPLVDNFKIPFLSRWGH RKSWLILCSSLMALVLIAMSKENPEVSLTFFYFLTILLGFLSSTFDIAVDALRIDKFDQETQSIASATAVFGYRIGMLIT GAGALYLAEITGNNWQLTFCVIAIIFVVVTIFIITVNEKELVREKILIFSLTSWISTVINPFKDFFKREFAATILLAVIF FKLGDAMLGAVASPFYIELGYTKGEIAIIAKLYGLIATLVGGFVGGIVMYRVGNFKGLIITGIAQSLTHFAFIWLNHQPP SFEALLIAITIENFAAAMGATALVGYIGNLCNKKYSATQYALLSSASSLCNNTVTIYAGKLVNMMGWDGFFLFTIILALP ALFIFMYLNKKVNV
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=410, Percent_Identity=32.6829268292683, Blast_Score=223, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45940; Mature: 45940
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITKIFKDYRLFEIFILGIVSGMPLVIIFSTLAVWLKESGIDIAVITTFAVARLSYSLK CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH VFWSPLVDNFKIPFLSRWGHRKSWLILCSSLMALVLIAMSKENPEVSLTFFYFLTILLGF HHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH LSSTFDIAVDALRIDKFDQETQSIASATAVFGYRIGMLITGAGALYLAEITGNNWQLTFC HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCEEHHHH VIAIIFVVVTIFIITVNEKELVREKILIFSLTSWISTVINPFKDFFKREFAATILLAVIF HHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKLGDAMLGAVASPFYIELGYTKGEIAIIAKLYGLIATLVGGFVGGIVMYRVGNFKGLII HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TGIAQSLTHFAFIWLNHQPPSFEALLIAITIENFAAAMGATALVGYIGNLCNKKYSATQY HHHHHHHHHEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ALLSSASSLCNNTVTIYAGKLVNMMGWDGFFLFTIILALPALFIFMYLNKKVNV HHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRITKIFKDYRLFEIFILGIVSGMPLVIIFSTLAVWLKESGIDIAVITTFAVARLSYSLK CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH VFWSPLVDNFKIPFLSRWGHRKSWLILCSSLMALVLIAMSKENPEVSLTFFYFLTILLGF HHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH LSSTFDIAVDALRIDKFDQETQSIASATAVFGYRIGMLITGAGALYLAEITGNNWQLTFC HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCEEHHHH VIAIIFVVVTIFIITVNEKELVREKILIFSLTSWISTVINPFKDFFKREFAATILLAVIF HHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKLGDAMLGAVASPFYIELGYTKGEIAIIAKLYGLIATLVGGFVGGIVMYRVGNFKGLII HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TGIAQSLTHFAFIWLNHQPPSFEALLIAITIENFAAAMGATALVGYIGNLCNKKYSATQY HHHHHHHHHEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ALLSSASSLCNNTVTIYAGKLVNMMGWDGFFLFTIILALPALFIFMYLNKKVNV HHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]