Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229586617

Identifier: 229586617

GI number: 229586617

Start: 475880

End: 476605

Strand: Direct

Name: 229586617

Synonym: RAF_ORF0445

Alternate gene names: NA

Gene position: 475880-476605 (Clockwise)

Preceding gene: 229586616

Following gene: 229586627

Centisome position: 37.22

GC content: 33.88

Gene sequence:

>726_bases
ATGAGTTTTTGTGTGGGATGTTTATATTTAACAAAATACATTATTCCTAATAATTTTCAAAAAGAAGAGCTTGGAAGTCT
TGGCGGGTTTTTATCGGGTGTAGTCGGTAGTATGTATGCGGTATCAACCGGTTTGGTATTAATTTATTTACTCGGTAATT
TTAATGAAGCACAAGAAGGGGTGGCAGCAGAATCTATAGTGTTGATGAGGCTTGCAGATAGTGTAGGTTGGCTTCCTCAT
GAAATGAGGCCTACAATTTATCTAGATATTAAAAATTATACCAAAGGTGTAATGCGGCGTGAATGGCAATTAATGAAAGA
CGGCAAGCAAATCGGTCATGAAGCTCTTAGTTTCCTCCAAGATATTAATAAGAGACTACAAGCTTATAAAGCAAGCGAGC
AAGTGCAGCTATTGACTAAGCAGGAAATCATTGAGGAGATAAAAGAGCTTTATACAGTAAGGTATAACAGGATTAAAATG
TCCTATTTTTCCTTAAATATTCAATATTGGATAGTTGTGTGTATAATGACTGCTATTAATTTAATTTTTGTCTGTATGTT
TGGCACCAAGCTTTATTTACATAAGATTTCGGTTGGTTTAGTTTGTATCACTTCATCATCAATGCTTTTGTTATTATTTA
TATTAGACAAACCTTTTCGAGGTCCTTTTGCCGTAAGTCAATATGACCTTATTAAGGCTGTACATTATATTGAGAGATTA
AATTAG

Upstream 100 bases:

>100_bases
TTCAGCAGGACATGGTTAATAATACCTATGTAATCATATAATTGACTTTATCTATACCGTTCCTAATATTGTTTTATTCA
TCATAATAAATATTGTTTTG

Downstream 100 bases:

>100_bases
TGATATCTGTAACAACATAACGCCATAATTTATCCGTGCCTTTAGTAATACCTATACGAGCAGTAGTAGAGTAGGGTAGC
TTTAAGCCGATATCGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSFCVGCLYLTKYIIPNNFQKEELGSLGGFLSGVVGSMYAVSTGLVLIYLLGNFNEAQEGVAAESIVLMRLADSVGWLPH
EMRPTIYLDIKNYTKGVMRREWQLMKDGKQIGHEALSFLQDINKRLQAYKASEQVQLLTKQEIIEEIKELYTVRYNRIKM
SYFSLNIQYWIVVCIMTAINLIFVCMFGTKLYLHKISVGLVCITSSSMLLLLFILDKPFRGPFAVSQYDLIKAVHYIERL
N

Sequences:

>Translated_241_residues
MSFCVGCLYLTKYIIPNNFQKEELGSLGGFLSGVVGSMYAVSTGLVLIYLLGNFNEAQEGVAAESIVLMRLADSVGWLPH
EMRPTIYLDIKNYTKGVMRREWQLMKDGKQIGHEALSFLQDINKRLQAYKASEQVQLLTKQEIIEEIKELYTVRYNRIKM
SYFSLNIQYWIVVCIMTAINLIFVCMFGTKLYLHKISVGLVCITSSSMLLLLFILDKPFRGPFAVSQYDLIKAVHYIERL
N
>Mature_240_residues
SFCVGCLYLTKYIIPNNFQKEELGSLGGFLSGVVGSMYAVSTGLVLIYLLGNFNEAQEGVAAESIVLMRLADSVGWLPHE
MRPTIYLDIKNYTKGVMRREWQLMKDGKQIGHEALSFLQDINKRLQAYKASEQVQLLTKQEIIEEIKELYTVRYNRIKMS
YFSLNIQYWIVVCIMTAINLIFVCMFGTKLYLHKISVGLVCITSSSMLLLLFILDKPFRGPFAVSQYDLIKAVHYIERLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27612; Mature: 27481

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFCVGCLYLTKYIIPNNFQKEELGSLGGFLSGVVGSMYAVSTGLVLIYLLGNFNEAQEG
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
VAAESIVLMRLADSVGWLPHEMRPTIYLDIKNYTKGVMRREWQLMKDGKQIGHEALSFLQ
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DINKRLQAYKASEQVQLLTKQEIIEEIKELYTVRYNRIKMSYFSLNIQYWIVVCIMTAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHEEEHHHHHHHHHHHHHHH
LIFVCMFGTKLYLHKISVGLVCITSSSMLLLLFILDKPFRGPFAVSQYDLIKAVHYIERL
HHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
N
C
>Mature Secondary Structure 
SFCVGCLYLTKYIIPNNFQKEELGSLGGFLSGVVGSMYAVSTGLVLIYLLGNFNEAQEG
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
VAAESIVLMRLADSVGWLPHEMRPTIYLDIKNYTKGVMRREWQLMKDGKQIGHEALSFLQ
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DINKRLQAYKASEQVQLLTKQEIIEEIKELYTVRYNRIKMSYFSLNIQYWIVVCIMTAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHEEEHHHHHHHHHHHHHHH
LIFVCMFGTKLYLHKISVGLVCITSSSMLLLLFILDKPFRGPFAVSQYDLIKAVHYIERL
HHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA