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The map label for this gene is ykpA [H]

Identifier: 229586567

GI number: 229586567

Start: 415943

End: 416152

Strand: Direct

Name: ykpA [H]

Synonym: RAF_ORF0388

Alternate gene names: 229586567

Gene position: 415943-416152 (Clockwise)

Preceding gene: 229586566

Following gene: 229586571

Centisome position: 32.53

GC content: 35.24

Gene sequence:

>210_bases
ATGAGCCGCTTTCTGTGTTGTCAGAAGGTTATAAACTTTCGTGTATTACTCGTACAAAGTCTATTTAATAATCCCGATAT
TTTACTACTCGATGAACCGACAAACCATCTTGATATAGAGTCAAGAGAAGCTCTTAAAAAATCGCTAATTGATTTTGATG
GTACGGTAATATTAGTAACGTACGATCGGAATTATTCCTCTTTCCCATAG

Upstream 100 bases:

>100_bases
GTTGTTTAAAACAAGATCAGTTTCTTTAATGACGGTTATACTTCTGAAATTTTTGCAGCTAGCTTGCTTGTAGGTCTTGG
AATAGCCAAAAAATACCATT

Downstream 100 bases:

>100_bases
GAAAAAGATTGTTGATTTTAAAGGTAAATTAAAATCAACAATCTTTATGATGATTATATTGAGAAATACGGCAACGATTA
TTTAAGTTCTACTACAAAAT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MSRFLCCQKVINFRVLLVQSLFNNPDILLLDEPTNHLDIESREALKKSLIDFDGTVILVTYDRNYSSFP

Sequences:

>Translated_69_residues
MSRFLCCQKVINFRVLLVQSLFNNPDILLLDEPTNHLDIESREALKKSLIDFDGTVILVTYDRNYSSFP
>Mature_68_residues
SRFLCCQKVINFRVLLVQSLFNNPDILLLDEPTNHLDIESREALKKSLIDFDGTVILVTYDRNYSSFP

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1787041, Length=53, Percent_Identity=52.8301886792453, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI2367384, Length=52, Percent_Identity=55.7692307692308, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1789751, Length=51, Percent_Identity=47.0588235294118, Blast_Score=62, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 8020; Mature: 7889

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFLCCQKVINFRVLLVQSLFNNPDILLLDEPTNHLDIESREALKKSLIDFDGTVILVT
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEE
YDRNYSSFP
ECCCCCCCC
>Mature Secondary Structure 
SRFLCCQKVINFRVLLVQSLFNNPDILLLDEPTNHLDIESREALKKSLIDFDGTVILVT
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEE
YDRNYSSFP
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]