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The map label for this gene is virB10 [H]

Identifier: 229586542

GI number: 229586542

Start: 389789

End: 391237

Strand: Direct

Name: virB10 [H]

Synonym: RAF_ORF0363

Alternate gene names: 229586542

Gene position: 389789-391237 (Clockwise)

Preceding gene: 229586541

Following gene: 229586543

Centisome position: 30.49

GC content: 39.06

Gene sequence:

>1449_bases
ATGGCTGAAGAGCAAAATAACAATCATAATACCGGTTCTTTATCAGGAGTAGATTCTCCTGAAGTACAAAGAGAATTATC
AAAAGTTTCGGTTAGCTTTAATAAGAGTATTGTGATAGTAGTAGTAATTTGTGGTATTTTTATATATATTTTTTATACTC
TTTTTTTCGGTACTGCAAAAGAAGAAATACCGGAGACTCAGATACCGAGTAATATTGTAAAACCTGTTACGGAGGTTGAT
GATAATATTCCGGAGATTCCAAAGTTACCTGATCCGCCTAAGCTTGAGACGCCCACCGCTCCTCCACCGCCTCCTCCTTC
GGTAGTAAAAGTTCCACCGGTCTTACCTCCTACTACTCCTGTAGAAGAGAATAAAGACAAAACGCTTCCATTGCCGCCGG
TTTCATTGCCTTCGACTTCAGGAACGTTAGTTGAGAGCAATGCAGAGGGGCAACGTCGTGAAGCAAAAAGAAAATCAGCT
ATAGTGTTAATTGGTGGTGTAGAGCCTAAAAAAACACCGGAACAGATTACGGCAGAAACGACCTTTAAAGATCGCGGTGA
TATGTCTTTGGTTCTCGGACGCGGTAAATTAATTGATGCAGTTCTTGAGACGGCAATAAATAGTGATCTCGGCGGTGAAA
TAAGAGCCATTATTAGTAGAGACGTATTTTCTGAGAAAGATAAAGTGATATTGATACCGAAAGGGTCAAAAATATTCGGT
AAATATGCAACCTCAACTTCGTCCGATAGTTATGGTAGAGTTTCTATAATATGGGATAGAATCGATTTAACGAGCGGTTA
TACTATAGAATTCGACTCACCTGCAGTTGATAATTTAGGTAGACCGGGATTACAAGGAAGAGTTGATAATAAATATAAAG
AACAATTTGCAAATGCCGTATTACAATCCGGCTTTAATATAGGGCTTGCTAAAGTGCTTGATAAGTTAGTGCCGCCTCCT
ATAGCTTCTCAGGCAGCGGCTACCAATAGTGCTACGGCAAAACAATTGTTAAATACTGCTCAAACTATTGCGTCTAATAC
CGCTATGGATGCAAATACTAGGATAGTTACAATTTGTACTAATATACTTGCTGCTATTACCGATAAAACTTCGACTGCTT
ATACTACTATGACTCAAGCATGTACAACCGCACAAACTGCTTCTTCAGCGAATACTGCTGAGCAGAGACTTCAAACCTTA
GTACAGGCAGTTAATACGGCAGCTTCAAGTTTGCTTACTACTACCTCTATAGCATCAACTCCGACTCAAGCACAACAAGC
TTCTACTCAAGCTTTTACGGATGTAACGAATGTTGTAAAAAATATGATAACTCAGCAGCAGTTTAAGCCGACGACAACGG
TTAATCAAGGTACGCCGGTTAGAATATACGTTAATAAGGATTATAAATTCCCAAAAGCCGTTTTATTAAAATCGAAGGTA
ATGAAATGA

Upstream 100 bases:

>100_bases
ATTGCGGACGTACAATTGTTCTGAGGTTTCCTCGCAATGACGGAAAAATTGATCCACGTAACAATGACAATAAAAACACT
TTAACTGATATAATTTAGAT

Downstream 100 bases:

>100_bases
GTGAAGAATTTGCAGCCTTAGAGACGTTTTTACTTCCTTTTAAAAATTTATTTGCTGAAGACGGTATTAACGAAATTATG
GTTAATAAGCCCGGAGAAGT

Product: VirB10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MAEEQNNNHNTGSLSGVDSPEVQRELSKVSVSFNKSIVIVVVICGIFIYIFYTLFFGTAKEEIPETQIPSNIVKPVTEVD
DNIPEIPKLPDPPKLETPTAPPPPPPSVVKVPPVLPPTTPVEENKDKTLPLPPVSLPSTSGTLVESNAEGQRREAKRKSA
IVLIGGVEPKKTPEQITAETTFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEKDKVILIPKGSKIFG
KYATSTSSDSYGRVSIIWDRIDLTSGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIGLAKVLDKLVPPP
IASQAAATNSATAKQLLNTAQTIASNTAMDANTRIVTICTNILAAITDKTSTAYTTMTQACTTAQTASSANTAEQRLQTL
VQAVNTAASSLLTTTSIASTPTQAQQASTQAFTDVTNVVKNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKSKV
MK

Sequences:

>Translated_482_residues
MAEEQNNNHNTGSLSGVDSPEVQRELSKVSVSFNKSIVIVVVICGIFIYIFYTLFFGTAKEEIPETQIPSNIVKPVTEVD
DNIPEIPKLPDPPKLETPTAPPPPPPSVVKVPPVLPPTTPVEENKDKTLPLPPVSLPSTSGTLVESNAEGQRREAKRKSA
IVLIGGVEPKKTPEQITAETTFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEKDKVILIPKGSKIFG
KYATSTSSDSYGRVSIIWDRIDLTSGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIGLAKVLDKLVPPP
IASQAAATNSATAKQLLNTAQTIASNTAMDANTRIVTICTNILAAITDKTSTAYTTMTQACTTAQTASSANTAEQRLQTL
VQAVNTAASSLLTTTSIASTPTQAQQASTQAFTDVTNVVKNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKSKV
MK
>Mature_481_residues
AEEQNNNHNTGSLSGVDSPEVQRELSKVSVSFNKSIVIVVVICGIFIYIFYTLFFGTAKEEIPETQIPSNIVKPVTEVDD
NIPEIPKLPDPPKLETPTAPPPPPPSVVKVPPVLPPTTPVEENKDKTLPLPPVSLPSTSGTLVESNAEGQRREAKRKSAI
VLIGGVEPKKTPEQITAETTFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEKDKVILIPKGSKIFGK
YATSTSSDSYGRVSIIWDRIDLTSGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIGLAKVLDKLVPPPI
ASQAAATNSATAKQLLNTAQTIASNTAMDANTRIVTICTNILAAITDKTSTAYTTMTQACTTAQTASSANTAEQRLQTLV
QAVNTAASSLLTTTSIASTPTQAQQASTQAFTDVTNVVKNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKSKVM
K

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 51775; Mature: 51643

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEQNNNHNTGSLSGVDSPEVQRELSKVSVSFNKSIVIVVVICGIFIYIFYTLFFGTAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
EEIPETQIPSNIVKPVTEVDDNIPEIPKLPDPPKLETPTAPPPPPPSVVKVPPVLPPTTP
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
VEENKDKTLPLPPVSLPSTSGTLVESNAEGQRREAKRKSAIVLIGGVEPKKTPEQITAET
CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHC
TFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEKDKVILIPKGSKIFG
CCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEE
KYATSTSSDSYGRVSIIWDRIDLTSGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAV
ECCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHH
LQSGFNIGLAKVLDKLVPPPIASQAAATNSATAKQLLNTAQTIASNTAMDANTRIVTICT
HHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHH
NILAAITDKTSTAYTTMTQACTTAQTASSANTAEQRLQTLVQAVNTAASSLLTTTSIAST
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTQAQQASTQAFTDVTNVVKNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKSKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
MK
CC
>Mature Secondary Structure 
AEEQNNNHNTGSLSGVDSPEVQRELSKVSVSFNKSIVIVVVICGIFIYIFYTLFFGTAK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
EEIPETQIPSNIVKPVTEVDDNIPEIPKLPDPPKLETPTAPPPPPPSVVKVPPVLPPTTP
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
VEENKDKTLPLPPVSLPSTSGTLVESNAEGQRREAKRKSAIVLIGGVEPKKTPEQITAET
CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHC
TFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEKDKVILIPKGSKIFG
CCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEE
KYATSTSSDSYGRVSIIWDRIDLTSGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAV
ECCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHH
LQSGFNIGLAKVLDKLVPPPIASQAAATNSATAKQLLNTAQTIASNTAMDANTRIVTICT
HHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHH
NILAAITDKTSTAYTTMTQACTTAQTASSANTAEQRLQTLVQAVNTAASSLLTTTSIAST
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTQAQQASTQAFTDVTNVVKNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKSKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
MK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]