Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229586539

Identifier: 229586539

GI number: 229586539

Start: 388185

End: 388364

Strand: Direct

Name: 229586539

Synonym: RAF_ORF0360

Alternate gene names: NA

Gene position: 388185-388364 (Clockwise)

Preceding gene: 229586529

Following gene: 229586540

Centisome position: 30.36

GC content: 32.22

Gene sequence:

>180_bases
ATGTTAAAATCATTAAAGCTTTTATTAGTATTAATTATGCTTGCTCAATTGTTGTCATGTACCCCTTCAGCTCCTTATGA
AATTAAAAGCCCGTGCGTTTCTGCTGATATAGATGATGGTTCGAGTGTAAGCGTAAATCCTTGTATAAGAAGACCTGTTA
ATTCAGTAAATATAGTATAA

Upstream 100 bases:

>100_bases
TATATTTATAAATAGATTTTTTTAAAAAATGCTTGTGAACTATTGTATAGTAAGGTAATTTTAAAATAGTAACAAGATAA
TTTAATAATGTATAATTAGA

Downstream 100 bases:

>100_bases
AAGTAATAGTTTTACACAATAACAATGTAATAATAAAAATACCTTTGATATGAATAATATATTTGGCTTCTTTAAATCAA
GTAATAACTCGCAAAGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MLKSLKLLLVLIMLAQLLSCTPSAPYEIKSPCVSADIDDGSSVSVNPCIRRPVNSVNIV

Sequences:

>Translated_59_residues
MLKSLKLLLVLIMLAQLLSCTPSAPYEIKSPCVSADIDDGSSVSVNPCIRRPVNSVNIV
>Mature_59_residues
MLKSLKLLLVLIMLAQLLSCTPSAPYEIKSPCVSADIDDGSSVSVNPCIRRPVNSVNIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6314; Mature: 6314

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLKLLLVLIMLAQLLSCTPSAPYEIKSPCVSADIDDGSSVSVNPCIRRPVNSVNIV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCC
>Mature Secondary Structure
MLKSLKLLLVLIMLAQLLSCTPSAPYEIKSPCVSADIDDGSSVSVNPCIRRPVNSVNIV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]