Click here to switch to the map view.

The map label for this gene is fbcH [H]

Identifier: 229586522

GI number: 229586522

Start: 364078

End: 364833

Strand: Direct

Name: fbcH [H]

Synonym: RAF_ORF0334

Alternate gene names: 229586522

Gene position: 364078-364833 (Clockwise)

Preceding gene: 229586521

Following gene: 229586523

Centisome position: 28.48

GC content: 40.74

Gene sequence:

>756_bases
ATGAAAACTAAACTACTTATCTCTATCATCATACTACTAACTTCGTGCTTAAGTTTAGCCAACGAAGAAGTATTACATCC
AAAAAAGATGAAATGGTCGTTTGACGGCGTATTTGGTACAGTTAATCGTGAAGCAGCACAAAGAGGTTTTCAGGTCTATA
AAGAAGTTTGTAGTGTCTGCCACGGTTTAAACAATTTATATTACCGTAATCTTAAAGATATCGGCTTTTCGGATGACGAG
ATAAAAGAGATTGCCAAAGGCTATACGATACAAGACGGACCTAATGATGATGGTGAGATGTTTGACCGCCCCGCTCTTCC
TTCTGATCGTTTTGTACCTCCTTACCCTAATGAGCAAGCAGCAAGAGCAGCTAATAACGGTGCCCATCCTCCTGATTTAT
CGTTGATAATAAAAGCACGTCATGACGGAGCTAATTATATATATTCGCTACTTACCGGCTATACCGAACCGCCGGCAGAT
TTTAAGTTGATGCAGGGGACTCATTATAATCCCTATTTCCCTGGCGAGCAAATAGCAATGCCGCCGCCGCTTACAGACGG
GCAGGTAACCTATATGGATGGTACTAACGCAAGTGTAGAGCAGATGTCGCAAGACATTGTGGTGTTTCTACAATGGGCAG
CTGAGCCGGAAATGGAACATCGTAAATCTATGGGTCTTAAAGTTATGATGTTTTTAGCGGTATTTACTATCTTTTTCTAT
ATTGCAAAAAACCGCATTTGGTCTAATTTAAAGTAA

Upstream 100 bases:

>100_bases
AAATCTCAACACAACAATCTTATAAAATAATATATAAACTCCTGAGATTGCTTCGTCAACATTTTCAATTTTTCCTTGCA
ATGACGACTCAAAAAAATTT

Downstream 100 bases:

>100_bases
TTGTTGAGTGGAGCAGTTTTCCTATTATTGGCGTTGTTGCATGGATCATTAAACATGTTCAATGTCATTTCTGCGAAAGC
AGGAATCCAGTAAAAAATGA

Product: Cytochrome c1, heme protein precursor

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKTKLLISIIILLTSCLSLANEEVLHPKKMKWSFDGVFGTVNREAAQRGFQVYKEVCSVCHGLNNLYYRNLKDIGFSDDE
IKEIAKGYTIQDGPNDDGEMFDRPALPSDRFVPPYPNEQAARAANNGAHPPDLSLIIKARHDGANYIYSLLTGYTEPPAD
FKLMQGTHYNPYFPGEQIAMPPPLTDGQVTYMDGTNASVEQMSQDIVVFLQWAAEPEMEHRKSMGLKVMMFLAVFTIFFY
IAKNRIWSNLK

Sequences:

>Translated_251_residues
MKTKLLISIIILLTSCLSLANEEVLHPKKMKWSFDGVFGTVNREAAQRGFQVYKEVCSVCHGLNNLYYRNLKDIGFSDDE
IKEIAKGYTIQDGPNDDGEMFDRPALPSDRFVPPYPNEQAARAANNGAHPPDLSLIIKARHDGANYIYSLLTGYTEPPAD
FKLMQGTHYNPYFPGEQIAMPPPLTDGQVTYMDGTNASVEQMSQDIVVFLQWAAEPEMEHRKSMGLKVMMFLAVFTIFFY
IAKNRIWSNLK
>Mature_251_residues
MKTKLLISIIILLTSCLSLANEEVLHPKKMKWSFDGVFGTVNREAAQRGFQVYKEVCSVCHGLNNLYYRNLKDIGFSDDE
IKEIAKGYTIQDGPNDDGEMFDRPALPSDRFVPPYPNEQAARAANNGAHPPDLSLIIKARHDGANYIYSLLTGYTEPPAD
FKLMQGTHYNPYFPGEQIAMPPPLTDGQVTYMDGTNASVEQMSQDIVVFLQWAAEPEMEHRKSMGLKVMMFLAVFTIFFY
IAKNRIWSNLK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21359867, Length=232, Percent_Identity=49.1379310344828, Blast_Score=237, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17506225, Length=245, Percent_Identity=40.4081632653061, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6324639, Length=240, Percent_Identity=45.8333333333333, Blast_Score=224, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24658292, Length=244, Percent_Identity=42.6229508196721, Blast_Score=216, Evalue=1e-56,
Organism=Drosophila melanogaster, GI21358225, Length=233, Percent_Identity=42.9184549356223, Blast_Score=211, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28399; Mature: 28399

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLLISIIILLTSCLSLANEEVLHPKKMKWSFDGVFGTVNREAAQRGFQVYKEVCSVC
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEECCCEEECCCHHHHHHHHHHHHHHHHHH
HGLNNLYYRNLKDIGFSDDEIKEIAKGYTIQDGPNDDGEMFDRPALPSDRFVPPYPNEQA
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHH
ARAANNGAHPPDLSLIIKARHDGANYIYSLLTGYTEPPADFKLMQGTHYNPYFPGEQIAM
HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
PPPLTDGQVTYMDGTNASVEQMSQDIVVFLQWAAEPEMEHRKSMGLKVMMFLAVFTIFFY
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
IAKNRIWSNLK
HHHHHHHCCCC
>Mature Secondary Structure
MKTKLLISIIILLTSCLSLANEEVLHPKKMKWSFDGVFGTVNREAAQRGFQVYKEVCSVC
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEECCCEEECCCHHHHHHHHHHHHHHHHHH
HGLNNLYYRNLKDIGFSDDEIKEIAKGYTIQDGPNDDGEMFDRPALPSDRFVPPYPNEQA
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHH
ARAANNGAHPPDLSLIIKARHDGANYIYSLLTGYTEPPADFKLMQGTHYNPYFPGEQIAM
HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
PPPLTDGQVTYMDGTNASVEQMSQDIVVFLQWAAEPEMEHRKSMGLKVMMFLAVFTIFFY
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
IAKNRIWSNLK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]