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The map label for this gene is rpmE [H]

Identifier: 229586340

GI number: 229586340

Start: 130042

End: 130278

Strand: Direct

Name: rpmE [H]

Synonym: RAF_ORF0125

Alternate gene names: 229586340

Gene position: 130042-130278 (Clockwise)

Preceding gene: 229586339

Following gene: 229586341

Centisome position: 10.17

GC content: 32.49

Gene sequence:

>237_bases
ATGAAAAGTGGTATACATCCAGAATATAAAAAGTTTTTGATTAAAGTAGGAAGTGATGTTTTTGAAACAATGTCTACTCA
TCCTACAGGTGAAATTTTAATGGATGTTGATTTTAGAAAGCATCCGGCATGGAATAAAGATTCCGGAAATGTAGTAAATC
AATCGAACAAAAGTGTTAGCGATTTCAATAAAAGATTCTCAGGTCTTTCTTTCGGTAGTAAGAAAGAAGCTAGCTAG

Upstream 100 bases:

>100_bases
GTTTTGATGCATATATTCTAAAAGCCGATGATAATGTTTTATCAAGTAACGCTAGAGCTATTAAGAAAAAAATAATTCAG
ACTAAAACAGCAAAATCATT

Downstream 100 bases:

>100_bases
GCTTTGTTTGTGGATAACAAATCGTCATTGCGAGGAAATTGCATAGCAATTGACGAAGCAATCCAGTAAACAATTTTGAT
TTATAGAATTTTTTTATTAT

Product: 50S ribosomal protein L31

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKSGIHPEYKKFLIKVGSDVFETMSTHPTGEILMDVDFRKHPAWNKDSGNVVNQSNKSVSDFNKRFSGLSFGSKKEAS

Sequences:

>Translated_78_residues
MKSGIHPEYKKFLIKVGSDVFETMSTHPTGEILMDVDFRKHPAWNKDSGNVVNQSNKSVSDFNKRFSGLSFGSKKEAS
>Mature_78_residues
MKSGIHPEYKKFLIKVGSDVFETMSTHPTGEILMDVDFRKHPAWNKDSGNVVNQSNKSVSDFNKRFSGLSFGSKKEAS

Specific function: Binds the 23S rRNA [H]

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type A subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 8751; Mature: 8751

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGIHPEYKKFLIKVGSDVFETMSTHPTGEILMDVDFRKHPAWNKDSGNVVNQSNKSVS
CCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHH
DFNKRFSGLSFGSKKEAS
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKSGIHPEYKKFLIKVGSDVFETMSTHPTGEILMDVDFRKHPAWNKDSGNVVNQSNKSVS
CCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHH
DFNKRFSGLSFGSKKEAS
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]