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The map label for this gene is sam

Identifier: 229586319

GI number: 229586319

Start: 101101

End: 101985

Strand: Direct

Name: sam

Synonym: RAF_ORF0102

Alternate gene names: 229586319

Gene position: 101101-101985 (Clockwise)

Preceding gene: 229586315

Following gene: 229586320

Centisome position: 7.91

GC content: 32.77

Gene sequence:

>885_bases
ATGAATGATGCATTAAAAACATATTTAACCGGTATAGGTTGGTTTTTACTTAGTTTAGTAAGTAGTAGTGCCAATGATGT
AATATCTAAATATCTTGGGACTCGTTTACATAGCTTTGAAGTAGCTTTTTTCCGCTTCTTTTTCAGTAGCATAGTTTTAC
TACCTTTTGTTGTTTATTATGGTAAAAATACTTTAAAAACAAGTCGTCCTTTTGTACATATATTAAGAGGGTTATTATTA
TTTTTCGGTATGACTTCTTGGACTTACGGTCTTACCATAGCTCCCGTTACTACTGCAACAGTTGTAAGTTTTTCTATTCC
TTTATTTACTTTAATACTTGCCGTATTTTTTCTGAACGAAAATATTATTTGGCCAAGATGGGTAGTTACCGTAGTAGGAT
TTATAGGACTTGTTGTTACTCTTAAACCGCATGCCGAGGATTTTAACCCAGAAATTTTGTATTTTGTATTAGCCGCTATT
TCATTTGCTATGCTTGATATTATTAATAAAAAATTCGTAATAAAAGAATCGATGATTAGCATGCTATTTTATTCGGCAAT
AGTAACTGCTATAGTGTCGTTACCTGTAGCATCGCAGTATTGGCTAACTCCTAGTAGTTTTGAATTAGCTTTATTGTTTG
TACTCGGTAGTAGTGGAAGCTTGATATTATTCTTCCTGCTTAAAGCTTTTTCTATGGTAGATGCAACCGCTACCGCTCCT
TATAGATATTTAGAGCTGGTGATTTCGGTAATAGCGGCATATTTCATATTTAACGAATTTCCTGATAAAAGCACACTTCA
TGGAGCAGTGATAATAATTCCTACCACCTTGTTTATAATATATTCCGAAAAAAAAGCTATGAATAGAAAACATGAATCGC
AGTAA

Upstream 100 bases:

>100_bases
TTTGTTTATATATTTATACCATTGTCATAAAAGATAGAATTCTTTTATGCTAAAAGTCAAGACATTTAAGTAAAATTATA
GAAATTATTGGAGCATATTA

Downstream 100 bases:

>100_bases
ACTAGTATTTTCAAGCGGTATCGCTAACACTTTTGAATGGTATGATTATGTATTATTCGGTTATTTTGCACCCATAATAG
GAACAAAATTTTTTCTAAAT

Product: S-adenosylmethionine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYGKNTLKTSRPFVHILRGLLL
FFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLNENIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAI
SFAMLDIINKKFVIKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMVDATATAP
YRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRKHESQ

Sequences:

>Translated_294_residues
MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYGKNTLKTSRPFVHILRGLLL
FFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLNENIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAI
SFAMLDIINKKFVIKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMVDATATAP
YRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRKHESQ
>Mature_294_residues
MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYGKNTLKTSRPFVHILRGLLL
FFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLNENIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAI
SFAMLDIINKKFVIKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMVDATATAP
YRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRKHESQ

Specific function: Transports S-adenosylmethionine

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SAM_RICCN (Q92JG1)

Other databases:

- EMBL:   AE006914
- PIR:   B97713
- RefSeq:   NP_359743.1
- GeneID:   928090
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0106
- OMA:   QRWVVTV
- ProtClustDB:   CLSK870734
- BioCyc:   RCON272944:RC0106-MONOMER
- InterPro:   IPR000620

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 33072; Mature: 33072

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x20145334)-; HASH(0x20e41c70)-; HASH(0x1fc4919c)-; HASH(0x20d1e498)-; HASH(0x20d9d6a0)-; HASH(0x206c9d88)-; HASH(0x20ab9dd8)-; HASH(0x202f38c0)-; HASH(0x1fe86574)-; HASH(0x203589a8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKNTLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLNE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
NIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAISFAMLDIINKKFVIKESMIS
CCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMVDATATAP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCH
YRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRKHESQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCHHHHCCCCCCH
>Mature Secondary Structure
MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKNTLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLNE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
NIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAISFAMLDIINKKFVIKESMIS
CCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMVDATATAP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCH
YRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRKHESQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893