| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is trpF
Identifier: 229269499
GI number: 229269499
Start: 2334521
End: 2335282
Strand: Reverse
Name: trpF
Synonym: BPSS1700
Alternate gene names: 229269499
Gene position: 2335282-2334521 (Counterclockwise)
Preceding gene: 53722721
Following gene: 53722719
Centisome position: 73.6
GC content: 71.65
Gene sequence:
>762_bases ATGACCGATACACCCGATGCGACCCTTCCGGCCGACGCGCCGCCGAACGACGCGCCCGCCGCCGGCGCGCGCCGCGACAC GGGCGGCGACGGGAGGCGCGACGCGCCGCCGCCGCGCACGCGGATCAAGCTCTGCGGGTTGTCGAACGCGGCCGATATCG ACTGGGCGGCCGAGCTCGGCGCCGATGCGATCGGCCTCGTGTTCTACCCGAAGAGCCCGCGCGCGGTGACGCTCGAGCAG GCGGCCGCGCTCGCCGCACGCGTGCCGCCGTTCGTATCGGTGGTCGGCCTGTTCGTGAACCCGACCGAGGACGAGATCGC CCGCGTCGCGAACGCGGTGCCGCTCACGCTGCTGCAATTCCATGGCGACGAGACGCCCGGGCAGTGCGCGTCGCTCGCGG CGGCGGCGCGCCTGCCTTGGCTGCGCGCGTTGCGCGTGGGCGTGGCGACGCAGCCGGCCGATTTGGTAGAATCGGCACTT CACTATTCGGCAGCCCGCGGCCTGTTGTTCGACACCCTCGTCGAGCACTACGGCGGCAGCGGCAAGGTCTTCGATTGGTC ACTTATCCCAGCAGAGCTCGCGCGTCGGGCCGTTTTGAGTGGTGGGTTGAACGCGCAAAACGTCGGTGACGCGATCCGTC AGGTGCGTCCGTTCGCGGTCGATGTCTCGAGCGGCATCGAAGCGCCGGGCGCGAAGGGCGTGAAGGATCGCGCCCGCATG GCGGCGTTCGTGCGCGCGGTGCGCGAGGCGGACGCCGGGTGA
Upstream 100 bases:
>100_bases TCGCGCACGTCGGCTATCCGGCCGAATTCGCGGTGCCGCCCGCACAGCTCGGCAGCGTGCCGTGGAGCAGCGTGTGGGCC GATCTGGACGGACGAACATG
Downstream 100 bases:
>100_bases TGCCAGTCCGCGCGGCGGGCGCCGGGAATCGAGAGCCCGGCGCGCCGCGTGGTCGAACCGAGAGTGACGTCATGTATAAC CTTCCCGATGATCGCGGCCA
Product: N-(5'-phosphoribosyl)anthranilate isomerase
Products: NA
Alternate protein names: PRAI [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTDTPDATLPADAPPNDAPAAGARRDTGGDGRRDAPPPRTRIKLCGLSNAADIDWAAELGADAIGLVFYPKSPRAVTLEQ AAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQFHGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESAL HYSAARGLLFDTLVEHYGGSGKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM AAFVRAVREADAG
Sequences:
>Translated_253_residues MTDTPDATLPADAPPNDAPAAGARRDTGGDGRRDAPPPRTRIKLCGLSNAADIDWAAELGADAIGLVFYPKSPRAVTLEQ AAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQFHGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESAL HYSAARGLLFDTLVEHYGGSGKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM AAFVRAVREADAG >Mature_252_residues TDTPDATLPADAPPNDAPAAGARRDTGGDGRRDAPPPRTRIKLCGLSNAADIDWAAELGADAIGLVFYPKSPRAVTLEQA AALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQFHGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESALH YSAARGLLFDTLVEHYGGSGKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARMA AFVRAVREADAG
Specific function: Bifunctional Enzyme That Catalyzes Two Sequential Steps Of Tryptophan Biosynthetic Pathway. The First Reaction Is Catalyzed By The Isomerase, Coded By The Trpf Domain; The Second Reaction Is Catalyzed By The Synthase, Coded By The Trpc Domain. [C]
COG id: COG0135
COG function: function code E; Phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpF family [H]
Homologues:
Organism=Escherichia coli, GI87081863, Length=208, Percent_Identity=32.2115384615385, Blast_Score=80, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320210, Length=225, Percent_Identity=27.5555555555556, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001240 - InterPro: IPR011060 [H]
Pfam domain/function: PF00697 PRAI [H]
EC number: =5.3.1.24 [H]
Molecular weight: Translated: 26344; Mature: 26213
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPDATLPADAPPNDAPAAGARRDTGGDGRRDAPPPRTRIKLCGLSNAADIDWAAELG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCC ADAIGLVFYPKSPRAVTLEQAAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQF CCEEEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHEE HGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESALHYSAARGLLFDTLVEHYGGS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM CCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHH AAFVRAVREADAG HHHHHHHHHHCCC >Mature Secondary Structure TDTPDATLPADAPPNDAPAAGARRDTGGDGRRDAPPPRTRIKLCGLSNAADIDWAAELG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCC ADAIGLVFYPKSPRAVTLEQAAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQF CCEEEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHEE HGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESALHYSAARGLLFDTLVEHYGGS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM CCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHH AAFVRAVREADAG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA