Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 229027857

Identifier: 229027857

GI number: 229027857

Start: 2002948

End: 2004156

Strand: Direct

Name: 229027857

Synonym: CPE1726

Alternate gene names: NA

Gene position: 2002948-2004156 (Clockwise)

Preceding gene: 18310687

Following gene: 18310709

Centisome position: 66.07

GC content: 27.21

Gene sequence:

>1209_bases
ATGAATATAACTGGCATAATAACTGAATATAACCCTTTTCATCTAGGTCATGAACTTCATCTAAAAAGTTCAAAAGAGAT
TACAAATTGCGATGGAGTTATTTGTGTTATGAGTGGAAACTTTGTGCAAAGAGGTTTGCCTGCTTTAACAGACAAATGGA
CTAGAACAAAAATGGCCTTAGAAGCTGGAGTTGATTTAGTTGTAGAACTTCCAACCCTTTTTGCAACTTCTTCAGCAGAA
TTTTTTGCCTTTGGTGCAGTATCTTTGCTTAATTCTTTAAATGTAGTTAATAATATTTGTTTTGGGTCAGAATGTGGAGA
TATAGATTTAATTAAAAAACTTAGTGAAATTATTATCAATGAACCCCCTCTATTTAAAGAATATTTAAAGGATTATTTAA
AGGAAGGACTTCCCTTTCCTAAAGCTAGAAGTGAAGCTTTAATGAAGTACTTAGATGATAATAATTATAAAATTGATTTT
TCATACTTAGAAAAAGTTCTAAACTCTTCTAATAATATATTAGCCATTGAATATTGCAAAAGCCTTTATAAGCTTCAAAG
TTCTATAAAACCTTTTACTATACAAAGATTAGGAGCAGATTACAATGATGAAGAACTTTCAAAAAATGAAATAGCTTCTG
CTTCTGCCATAAGAAAAAGTATTTATACTTCAAATATGGAAGAAAGTCTTGATTTTATGCCTGAGTATAGCTATAACTTA
TTAAAAAATACTTCTTTTAGTGATTTAGATAAAATGTTTGACTTAGTAAAATACGCTATAGTAAGCAATCCTAATGTATT
AAAAGAAATACCAGAGGCTTCTGAAGGCATAGATAATAAGATAATTCAAAACATAGGAAAAGCTAATTCCTTAGATGAAT
TAATAAATCTATGTAAAAGTAAGCGCTATTCATACACTAGATTAAATAGAATTTTATGTCACGTACTATTAAATGTAAAT
AAAGATCTTCTTTCTCTTAGAAAATCTTCTCCTAATTATGTAAGAATCTTAGGATTTAATAATAAAGGAAGGGAAATTTT
AAAAGAGATTAAGAAAAATTCTGAAATAAATATCGTTAATAAATTATCAAAAGCTAAAGCAGATCCTTTGTTAGAATTTG
ACATAAAAGCCACTAATATTTATAGCTTTCTAAATCCATCAGTTAAAATTAACAGTGATTATTTAATTAGTCCTATTATT
TTTAGATAA

Upstream 100 bases:

>100_bases
TTTAAAATTATCTGAATTTTCTAATAAATATATACACTTTATTATTTTTATATATTAGGTTATTATAATTTTATCAAAAT
AGGAAAAAGTGGTGATTTAA

Downstream 100 bases:

>100_bases
CAATAATATTATTATATTTACTTAAATATAAATACTATATATGATTTCGTAAAAGGAGGAAACCATGTATAGTATTTTAT
TTTTACTTATAATAATACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNITGIITEYNPFHLGHELHLKSSKEITNCDGVICVMSGNFVQRGLPALTDKWTRTKMALEAGVDLVVELPTLFATSSAE
FFAFGAVSLLNSLNVVNNICFGSECGDIDLIKKLSEIIINEPPLFKEYLKDYLKEGLPFPKARSEALMKYLDDNNYKIDF
SYLEKVLNSSNNILAIEYCKSLYKLQSSIKPFTIQRLGADYNDEELSKNEIASASAIRKSIYTSNMEESLDFMPEYSYNL
LKNTSFSDLDKMFDLVKYAIVSNPNVLKEIPEASEGIDNKIIQNIGKANSLDELINLCKSKRYSYTRLNRILCHVLLNVN
KDLLSLRKSSPNYVRILGFNNKGREILKEIKKNSEINIVNKLSKAKADPLLEFDIKATNIYSFLNPSVKINSDYLISPII
FR

Sequences:

>Translated_402_residues
MNITGIITEYNPFHLGHELHLKSSKEITNCDGVICVMSGNFVQRGLPALTDKWTRTKMALEAGVDLVVELPTLFATSSAE
FFAFGAVSLLNSLNVVNNICFGSECGDIDLIKKLSEIIINEPPLFKEYLKDYLKEGLPFPKARSEALMKYLDDNNYKIDF
SYLEKVLNSSNNILAIEYCKSLYKLQSSIKPFTIQRLGADYNDEELSKNEIASASAIRKSIYTSNMEESLDFMPEYSYNL
LKNTSFSDLDKMFDLVKYAIVSNPNVLKEIPEASEGIDNKIIQNIGKANSLDELINLCKSKRYSYTRLNRILCHVLLNVN
KDLLSLRKSSPNYVRILGFNNKGREILKEIKKNSEINIVNKLSKAKADPLLEFDIKATNIYSFLNPSVKINSDYLISPII
FR
>Mature_402_residues
MNITGIITEYNPFHLGHELHLKSSKEITNCDGVICVMSGNFVQRGLPALTDKWTRTKMALEAGVDLVVELPTLFATSSAE
FFAFGAVSLLNSLNVVNNICFGSECGDIDLIKKLSEIIINEPPLFKEYLKDYLKEGLPFPKARSEALMKYLDDNNYKIDF
SYLEKVLNSSNNILAIEYCKSLYKLQSSIKPFTIQRLGADYNDEELSKNEIASASAIRKSIYTSNMEESLDFMPEYSYNL
LKNTSFSDLDKMFDLVKYAIVSNPNVLKEIPEASEGIDNKIIQNIGKANSLDELINLCKSKRYSYTRLNRILCHVLLNVN
KDLLSLRKSSPNYVRILGFNNKGREILKEIKKNSEINIVNKLSKAKADPLLEFDIKATNIYSFLNPSVKINSDYLISPII
FR

Specific function: Unknown

COG id: COG1323

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0348 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR008513 [H]

Pfam domain/function: PF05636 DUF795 [H]

EC number: NA

Molecular weight: Translated: 45550; Mature: 45550

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITGIITEYNPFHLGHELHLKSSKEITNCDGVICVMSGNFVQRGLPALTDKWTRTKMAL
CCCEEEEECCCCEECCCEEECCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHH
EAGVDLVVELPTLFATSSAEFFAFGAVSLLNSLNVVNNICFGSECGDIDLIKKLSEIIIN
HHCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
EPPLFKEYLKDYLKEGLPFPKARSEALMKYLDDNNYKIDFSYLEKVLNSSNNILAIEYCK
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEEHHHHH
SLYKLQSSIKPFTIQRLGADYNDEELSKNEIASASAIRKSIYTSNMEESLDFMPEYSYNL
HHHHHHHCCCCEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHH
LKNTSFSDLDKMFDLVKYAIVSNPNVLKEIPEASEGIDNKIIQNIGKANSLDELINLCKS
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHH
KRYSYTRLNRILCHVLLNVNKDLLSLRKSSPNYVRILGFNNKGREILKEIKKNSEINIVN
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHH
KLSKAKADPLLEFDIKATNIYSFLNPSVKINSDYLISPIIFR
HHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCEECCCCCCC
>Mature Secondary Structure
MNITGIITEYNPFHLGHELHLKSSKEITNCDGVICVMSGNFVQRGLPALTDKWTRTKMAL
CCCEEEEECCCCEECCCEEECCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHH
EAGVDLVVELPTLFATSSAEFFAFGAVSLLNSLNVVNNICFGSECGDIDLIKKLSEIIIN
HHCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
EPPLFKEYLKDYLKEGLPFPKARSEALMKYLDDNNYKIDFSYLEKVLNSSNNILAIEYCK
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEEHHHHH
SLYKLQSSIKPFTIQRLGADYNDEELSKNEIASASAIRKSIYTSNMEESLDFMPEYSYNL
HHHHHHHCCCCEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHH
LKNTSFSDLDKMFDLVKYAIVSNPNVLKEIPEASEGIDNKIIQNIGKANSLDELINLCKS
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHH
KRYSYTRLNRILCHVLLNVNKDLLSLRKSSPNYVRILGFNNKGREILKEIKKNSEINIVN
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHH
KLSKAKADPLLEFDIKATNIYSFLNPSVKINSDYLISPIIFR
HHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA