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The map label for this gene is rne

Identifier: 227833691

GI number:

Start: 2068926

End: 2072114

Strand: Reverse

Name: rne

Synonym: cauri_1867

Alternate gene names: NA

Gene position: NA

Preceding gene: 227833693

Following gene: 227833690

Centisome position: NA

GC content: NA

Gene sequence:

>3189_bases
ATGGCATCCAAGAAGAAAACAGAAGAAGCACGTAGTGAATCGACGTTGGCCGCAGCTGTAGCGGGGATTGACCGCGAGGC
GCTCGCCCCCAAAACCCGCCTCTATGCCCTGGCTAAACAGGTGGGCGTGGCCTCCAAGGAACTGGTGGCTCAGTTCGCAC
AGATGGGAATTAAGAAGTCTGCGCAGTCCTCGCTGACCCCGGAAGAGGTGGGCCAGCTTATCGACGCCCTCGTACCCGCC
ACCGAAACCCCCGAGCCGGCCGCAGCCGAGGGCAACCAGGTCGTGGCCGAGGACGCCGACCAGCCGGAGGGTTCGGCAGA
GGACAAGCCCACGAAGACCGTCAAGAAGAAGCGCGCGAAGCGCGCGGTCAAACGCGTGAGCAAGGCAGGCAAGAAGGCTG
AGTCGAAGGAGCAGACAGAGGAACCCACACCGGAAGAGTCTGCTGCGCAACCGGACGGCGCGGGGGAGTTCCAGGAAGCC
GCGCCGGCACAGGATGCTGAGCAGGCCGCGCAACCGGAGCAGCTGAGCGAGGAGGAAGAGAAGCTGCGCGAGCGCGTGCG
TAAGAACGTTGATAACGAGATTTCGCAGATCGTCGACAAAGTCGATGCCGAAATGCTGCACGAGGCGCTCGCCGAGGCCG
GTGATAGCGACGAGGAGGACGACGACCTTACCCCGCTGATCACCCCGATGGCGGAGGAAGACCCAGACGTGTACGACTTT
GCGCCAGTCTTCATGGCGCCGAAGATCACGCCGCTGTCCAAGCGTCAGAAGCCAGAAGAGCGCGAGGAGGAATCCGAGGA
GGATACAGCGCCGGTAAGCCAGCCGTGCGGTCGTCGGCGCGGCAGCCGCGGCACCTCCCGTGGCCGCGGAGCAGAAGGCC
GTGGGTCCGCCCGTGAGGAAGTCGAGCACATCGAAGAACCGAAGGCGATTAAGGGCTCGACCCGCATCGAGGCACAGCGC
CGTCGCCGCGCGGAGCTGCGGGAGAAAGGCCGGGAGCGCCAGCACATTGTCTCCCAAGCGGAGTTCCTGGCTCGCCGCGA
ATCCGTCGAGCGCACCATGGTGGTGCGCGATAAACAACGCACCGACGGCGCGGGCATCATCACGCAGGTCGGCGTGTTGG
AGGATGACCTTTTGGTCGAACACTTCGTCACGACCGAAACGCACCCGTCCCAGATAGGCAATATCTACTTGGGCCGTGTG
CAGAATGTCTTGCCTTCGATGGAGGCGGCCTTCGTGGATATCGGACAGGGCCGAAACGGTGTGTTGTACGCGGGCGACAT
CGACTGGCGGGCCTTGGGGATTGGTGGGCGCAGCCGCAAGGTAGAAAACGCCTTGAAGTCTGGTGATCAGGTTCTCGTCC
AGGTGGCCAAGGACCCCATCGGTCATAAGGGCGCACGTTTGACCACCCAGATCTCCCTGGCCGGTCGCTTCCTGGTGTAC
GTTCCCGGCGGGCGCAGCGCGGGAATCTCCCGCAAGCTGCCGGCACCGGAGCGCAAGCGCCTCAAGGGCATTCTGGAGCG
CGTCATCCCAGGGGATGGCGGCGCCATCATCCGCACGGCCGCGGAAAACGTGTCGGAGGAGGACATTGCCTCCGACGTCA
ACCGCCTGCACTCCCTGTGGGAGGACATCAGCGCCCGCGCCGCGCATGAAAAGGCAACGAAGGGTGCCAAGCCGGTTACC
CTATATGAAGAGCCGGATCTGCTCATCAAAGTGGTGCGCGACCTCTTTAATGAGGACTTCAGCACCTTGGTGGTGGATGG
TAAGCGTTCCTACAACACGGTCAGCGCCTACGTGGATTCCATGGCGCATGACTTGGCCGACCGCGTGGTGCGCTATGACG
CGCGCGAGCACGATGGTGAGGATGCCTTTAGCGCCTACCGCATCGATGAGCAGCTGCAGAAGGCTCTCGGCCGCAAGGTC
TGGCTGCCGTCGGGGGGAACGCTCGTTATTGACCGGACGGAGGCCATGACGGTCATTGACGTCAACACGGGCAAGTTCAC
CGGCTCCGGCGGCAACCTCGAGGAGACGGTGACCCGCAATAACCTCGAAGCAGCCGAGGAGATCGTGCGCCAGATGCGCC
TGCGCGATATCGGCGGCATGATCGTCGTGGACTTCATCGACATGGTGCTGCCGGAAAACCAGGACCTTGTGCTGCGCCGC
CTCAAGGAAGCGCTGGGACGCGACCGGACTCGTCACCAGGTTTCTGAGGTCACCTCACTGGGCTTGGTGCAGATGACGCG
CAAGCGCGTGGGCACCGGCCTCATCGAGACTTTCTCCACCGAGTGCGAGGCCTGCCATGGCCGGGGCATCATCATTCACG
AGTACCCGGTTGATGAGGACCCCGAGGAGGAGAACTCGAAGCCGCAGCGCCGCGGCCGTAAGGAACGCCGTGCACCGCAG
CGCGATCCGAAGAAGCACCCGGCCGCCGTCCGTATGCACCGCGACGATGAGGACGCCGCCGCCGAGCACGAAACTGCCAC
AGAAAAGGAAACTTCGCGCGACGACGACTCCTCCTTGGAGGAGCTCGTGGCCAACGTGGTCGTCGTCGACGAGGACGAGC
CGGAGACCCCGGATAGCGCTTCCATTGGCTATGCCGTAGCGGAAAGCCTGGACGCGAAACGCTCGAAGCCGAAGCCGAAG
TCGAAGGCGAAGCGCTCGCGCAAGCCGCGCCGGGCAACGCGTACCTTCCGGGAGCCACAGCGCGAAGAGACGAGTGAGGG
CTCGCGCGCGAAGCACGGCAAGCGCGATGAGCACGCCGATGCGGAAAAGGCATCCCCGCAGCGCTCGGAGCAGACCTATG
AAGAGGCCGTCGAGGCTTTTGAGAAGTCACCGCGCCGCAAGCGCCGCACGCGCGGAAACTCCCGTTCGGATATTCGCCCG
AAGCGTGAAGACTTCGCGCAGGACGAGACCTCAGCAAAGGACGCTCAACTAGCCACCTCTAAGAAGGAGGCCAAGGCTGA
GCGCAAGGGTGCGGAGCCGGGCGAGAACACGAGCGTGCGCGCGACCCGCAGCCGCGGCCGCCGCCGAGTGGTGCGCAAGA
TGGCACAGAGCCAGTCCACCCCGGCGTCGAATGATCGCGAACAGGGGAGCGAGGCGCAGCGGCGAGAGTCTTCCGCACAG
ACCACAGCGTCGAAGGCACGAAAGGGCGGGCGCGGGAGGCGTCGTGTAACACGGCGCAGGTCGCGCTAG

Upstream 100 bases:

>100_bases
TGACAATTTAATAAAGACGAAGAGAATTTTTCAAAGACTCACTACCGTGTGGCGGCAACCTGCGCCCGGGGTGAGCACAA
CCTCAGGAGATTAGCCACTG

Downstream 100 bases:

>100_bases
AAAAGGCGTTTTGCCTTTTCGCCCCCTCACGGGGTAGTCTTTGACAGTCGCTGTTTAGACCATGAATGCGCTGGATGGGA
CGAACGCGGTTTTCGCGCGT

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1062_residues
MASKKKTEEARSESTLAAAVAGIDREALAPKTRLYALAKQVGVASKELVAQFAQMGIKKSAQSSLTPEEVGQLIDALVPA
TETPEPAAAEGNQVVAEDADQPEGSAEDKPTKTVKKKRAKRAVKRVSKAGKKAESKEQTEEPTPEESAAQPDGAGEFQEA
APAQDAEQAAQPEQLSEEEEKLRERVRKNVDNEISQIVDKVDAEMLHEALAEAGDSDEEDDDLTPLITPMAEEDPDVYDF
APVFMAPKITPLSKRQKPEEREEESEEDTAPVSQPCGRRRGSRGTSRGRGAEGRGSAREEVEHIEEPKAIKGSTRIEAQR
RRRAELREKGRERQHIVSQAEFLARRESVERTMVVRDKQRTDGAGIITQVGVLEDDLLVEHFVTTETHPSQIGNIYLGRV
QNVLPSMEAAFVDIGQGRNGVLYAGDIDWRALGIGGRSRKVENALKSGDQVLVQVAKDPIGHKGARLTTQISLAGRFLVY
VPGGRSAGISRKLPAPERKRLKGILERVIPGDGGAIIRTAAENVSEEDIASDVNRLHSLWEDISARAAHEKATKGAKPVT
LYEEPDLLIKVVRDLFNEDFSTLVVDGKRSYNTVSAYVDSMAHDLADRVVRYDAREHDGEDAFSAYRIDEQLQKALGRKV
WLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIVVDFIDMVLPENQDLVLRR
LKEALGRDRTRHQVSEVTSLGLVQMTRKRVGTGLIETFSTECEACHGRGIIIHEYPVDEDPEEENSKPQRRGRKERRAPQ
RDPKKHPAAVRMHRDDEDAAAEHETATEKETSRDDDSSLEELVANVVVVDEDEPETPDSASIGYAVAESLDAKRSKPKPK
SKAKRSRKPRRATRTFREPQREETSEGSRAKHGKRDEHADAEKASPQRSEQTYEEAVEAFEKSPRRKRRTRGNSRSDIRP
KREDFAQDETSAKDAQLATSKKEAKAERKGAEPGENTSVRATRSRGRRRVVRKMAQSQSTPASNDREQGSEAQRRESSAQ
TTASKARKGGRGRRRVTRRRSR

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA