| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828843
Identifier: 227828843
GI number: 227828843
Start: 2439296
End: 2440207
Strand: Direct
Name: 227828843
Synonym: M1425_2616
Alternate gene names: NA
Gene position: 2439296-2440207 (Clockwise)
Preceding gene: 227828841
Following gene: 227828844
Centisome position: 93.5
GC content: 37.06
Gene sequence:
>912_bases ATGCCAATATGCCCCTCATGTGAAATGAAATTTAACTCATGGGAGGATTTAGCCAAGCACATGGACGTGCTAGCAAATTA TAAGAGTGACCCATCTCATGTAATGTGGTTAAACAGAAATATATCAATGAAGAGAATAGAAGTTAGTGAACTAGCAAGTA ATTTAGAGAGCTTCTTCTCAACTCCAGATGGTTTAGCAATGTGGATTAGGAAGAGGTTTATAGAGAAGTTTTATGGAGAA AATCCACATCCGTTTATTGTCGCAATGCAGAAACCAACTAGGGGTGTGCTATTAGGCTATGTAATTGAGCATCAACACTT CTTAAAGAATTGGGTAAAAGTGTTATCATCAATAGTATTCAAAACTAACAAGGATGATGTTATGCGATACGAGTTAGAGA ATATCTCAGTTGAATTTTTAGGATATAATGGAAGACCAGCCCATTACGAGTTGTTAATAAGAATGGGAGAAGCCTTGGGA ATGCCTAGGGAGGAAATATTATCAAAGCTACCATTGCCCTCTACGCAATCAGCGATAAAGACATGGAGAAAAATAGCTGA GAGTAAAACTTGGTTAGAAACAATGGCATCAATGCATAGCCTCGAATTAGTAGCTGATAGGAGTTTAGTTAAATATGGGG CTAGATTACCTTATTTTAATCAAGCCATACTCACTTCTGAAGAGTTTCCCCAAGCTGTTAAGGACTTTTTGAGGGAAGGT TATGAGGCTGATATCTCACACGCGGGAGAAGCCCTAGAAATGGTTGAAAAATATGCAGAAGAGATGAATATAAGGGAAGA AGTACAAGTTACTGTTCTTAAGTCATTTGATGCTTTTTCAAAGTATTTATTAGCCAGATTAGAAAGAGGATTCGAAATAG AACCCAGTCTGGTAAAGGTGATAATAAAATGA
Upstream 100 bases:
>100_bases TAATACGGTTATGCAAAAATAAGTAGGTCAATAACGAAACTATGGACATACTCATCTCTAACTAAATTAAACTTAATAAG GAAAACATTGAGTATTACTT
Downstream 100 bases:
>100_bases AGATCGTCGTAAACGGAAAAGAAGCCGGTACAAAGGAGAATGGTTGTGCACTCTGTGGAGGAACTTGGGGAGATTACTAT GAAGAGATTGAAGGAGAGAA
Product: TENA/THI-4 domain protein
Products: NA
Alternate protein names: TENA/THI-4 Domain Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPICPSCEMKFNSWEDLAKHMDVLANYKSDPSHVMWLNRNISMKRIEVSELASNLESFFSTPDGLAMWIRKRFIEKFYGE NPHPFIVAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTNKDDVMRYELENISVEFLGYNGRPAHYELLIRMGEALG MPREEILSKLPLPSTQSAIKTWRKIAESKTWLETMASMHSLELVADRSLVKYGARLPYFNQAILTSEEFPQAVKDFLREG YEADISHAGEALEMVEKYAEEMNIREEVQVTVLKSFDAFSKYLLARLERGFEIEPSLVKVIIK
Sequences:
>Translated_303_residues MPICPSCEMKFNSWEDLAKHMDVLANYKSDPSHVMWLNRNISMKRIEVSELASNLESFFSTPDGLAMWIRKRFIEKFYGE NPHPFIVAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTNKDDVMRYELENISVEFLGYNGRPAHYELLIRMGEALG MPREEILSKLPLPSTQSAIKTWRKIAESKTWLETMASMHSLELVADRSLVKYGARLPYFNQAILTSEEFPQAVKDFLREG YEADISHAGEALEMVEKYAEEMNIREEVQVTVLKSFDAFSKYLLARLERGFEIEPSLVKVIIK >Mature_302_residues PICPSCEMKFNSWEDLAKHMDVLANYKSDPSHVMWLNRNISMKRIEVSELASNLESFFSTPDGLAMWIRKRFIEKFYGEN PHPFIVAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTNKDDVMRYELENISVEFLGYNGRPAHYELLIRMGEALGM PREEILSKLPLPSTQSAIKTWRKIAESKTWLETMASMHSLELVADRSLVKYGARLPYFNQAILTSEEFPQAVKDFLREGY EADISHAGEALEMVEKYAEEMNIREEVQVTVLKSFDAFSKYLLARLERGFEIEPSLVKVIIK
Specific function: Unknown
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35124; Mature: 34993
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPICPSCEMKFNSWEDLAKHMDVLANYKSDPSHVMWLNRNISMKRIEVSELASNLESFFS CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC TPDGLAMWIRKRFIEKFYGENPHPFIVAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVF CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTNKDDVMRYELENISVEFLGYNGRPAHYELLIRMGEALGMPREEILSKLPLPSTQSAIK CCCCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH TWRKIAESKTWLETMASMHSLELVADRSLVKYGARLPYFNQAILTSEEFPQAVKDFLREG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCC YEADISHAGEALEMVEKYAEEMNIREEVQVTVLKSFDAFSKYLLARLERGFEIEPSLVKV CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IIK HCC >Mature Secondary Structure PICPSCEMKFNSWEDLAKHMDVLANYKSDPSHVMWLNRNISMKRIEVSELASNLESFFS CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC TPDGLAMWIRKRFIEKFYGENPHPFIVAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVF CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTNKDDVMRYELENISVEFLGYNGRPAHYELLIRMGEALGMPREEILSKLPLPSTQSAIK CCCCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH TWRKIAESKTWLETMASMHSLELVADRSLVKYGARLPYFNQAILTSEEFPQAVKDFLREG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCC YEADISHAGEALEMVEKYAEEMNIREEVQVTVLKSFDAFSKYLLARLERGFEIEPSLVKV CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IIK HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA