| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828833
Identifier: 227828833
GI number: 227828833
Start: 2429728
End: 2430636
Strand: Direct
Name: 227828833
Synonym: M1425_2607
Alternate gene names: NA
Gene position: 2429728-2430636 (Clockwise)
Preceding gene: 227828827
Following gene: 227828835
Centisome position: 93.13
GC content: 32.67
Gene sequence:
>909_bases ATGAGTGAAATATTAGAGCTAATAAATAAAGGGAAATACAGTGAGGCCTTAAAGAGAATTAAAGAAAAAATAGAGCAAAA GAAAGACGATCCAGAACTATATTATTTGATGGGGCTAGTATATTTTAAGGCTGGTAAGTATAAAAGGGCAATAGATAGCT TAAGTAAAGCGGTTAGGCTAAAGGGGGATGAGGCAAAATACCATTGTCTGTTAGGTTATTCACTATATGGTGAAGGATAT GCCAATGGCGATGAAAAATTAATAAGAAGGGCCTTAAAGGAACTTCAACTTTCAGTAGAGATCGATAAGGATATACCTAA TAAGGAGAAGGAATATCATTACTACATGGCTAATATCTTATATGAACTAGAAGATTATGAAAAAGCTTTAAAAGAGGTTA ATGAGGCTTTAAAATTTGACAACTCTCCGTTAGTTCATAAGTTAAAAGGTGATATTTTATTTCAATTGAAGAAATACAAC GAAGCAATTGAGGAGTATAGGACTAACTTAAACGATGATAAAAACCTCTACGCAATAGCGTATACGTATTTTACGATAGG AAAGTATGAACAAGCCCTTGAGTACTACGATAGGGCAATAGGTGTAAATCCAGAAGATCCGTATCATTACGAAGGCAAAG CTAGAACATTAATCTTTATGGAAAAAATTAATGAGGCTTATGAGACCATAAAGAAAGCTATAGATATTGATCCAGATAAC CCTTACATAAAACTAACAGAAATAGAAGTCCTAGCAGAGATTGATAAGAGAAGAGTGACAAAAGTTTTAACAGAATATTT AGAGGAGACGGAGGAATATAGAGAAGTTATTTGTGAAGAAAGTAAGGAGAGAAAATTTAAGGAAAAAACTAGAGAACTTA TAGAGGAAATATTAGTTAAGTTTTGCTAG
Upstream 100 bases:
>100_bases AAAAATAAATGGTTATCCTAATATTAATATAGAAATTGAAGACTTAAAGCTAGTGAACAAAAGAAAACGTTATTAAATAA GAGGAGCTAAAGAAGAATAG
Downstream 100 bases:
>100_bases CTAAATCGAAAAACGCTCTCCAGAAGGGATCCTCTAATGGATGTTCAATCTTTACTCTACTTCCATCTATCTTAACTAAC TTTACATCTCCACTTTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; O-Linked N-Acetylglucosamine Transferase; TPR Domain-Containing Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family; Protein Prenyltransferase Subunit Alpha; Peptidase; 72K Mitochondrial Outer Membrane Protein Related Protein; O-Linked GlcNAc Transferase; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSEILELINKGKYSEALKRIKEKIEQKKDDPELYYLMGLVYFKAGKYKRAIDSLSKAVRLKGDEAKYHCLLGYSLYGEGY ANGDEKLIRRALKELQLSVEIDKDIPNKEKEYHYYMANILYELEDYEKALKEVNEALKFDNSPLVHKLKGDILFQLKKYN EAIEEYRTNLNDDKNLYAIAYTYFTIGKYEQALEYYDRAIGVNPEDPYHYEGKARTLIFMEKINEAYETIKKAIDIDPDN PYIKLTEIEVLAEIDKRRVTKVLTEYLEETEEYREVICEESKERKFKEKTRELIEEILVKFC
Sequences:
>Translated_302_residues MSEILELINKGKYSEALKRIKEKIEQKKDDPELYYLMGLVYFKAGKYKRAIDSLSKAVRLKGDEAKYHCLLGYSLYGEGY ANGDEKLIRRALKELQLSVEIDKDIPNKEKEYHYYMANILYELEDYEKALKEVNEALKFDNSPLVHKLKGDILFQLKKYN EAIEEYRTNLNDDKNLYAIAYTYFTIGKYEQALEYYDRAIGVNPEDPYHYEGKARTLIFMEKINEAYETIKKAIDIDPDN PYIKLTEIEVLAEIDKRRVTKVLTEYLEETEEYREVICEESKERKFKEKTRELIEEILVKFC >Mature_301_residues SEILELINKGKYSEALKRIKEKIEQKKDDPELYYLMGLVYFKAGKYKRAIDSLSKAVRLKGDEAKYHCLLGYSLYGEGYA NGDEKLIRRALKELQLSVEIDKDIPNKEKEYHYYMANILYELEDYEKALKEVNEALKFDNSPLVHKLKGDILFQLKKYNE AIEEYRTNLNDDKNLYAIAYTYFTIGKYEQALEYYDRAIGVNPEDPYHYEGKARTLIFMEKINEAYETIKKAIDIDPDNP YIKLTEIEVLAEIDKRRVTKVLTEYLEETEEYREVICEESKERKFKEKTRELIEEILVKFC
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35854; Mature: 35723
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILELINKGKYSEALKRIKEKIEQKKDDPELYYLMGLVYFKAGKYKRAIDSLSKAVRL CHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC KGDEAKYHCLLGYSLYGEGYANGDEKLIRRALKELQLSVEIDKDIPNKEKEYHYYMANIL CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHH YELEDYEKALKEVNEALKFDNSPLVHKLKGDILFQLKKYNEAIEEYRTNLNDDKNLYAIA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE YTYFTIGKYEQALEYYDRAIGVNPEDPYHYEGKARTLIFMEKINEAYETIKKAIDIDPDN EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PYIKLTEIEVLAEIDKRRVTKVLTEYLEETEEYREVICEESKERKFKEKTRELIEEILVK CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FC CC >Mature Secondary Structure SEILELINKGKYSEALKRIKEKIEQKKDDPELYYLMGLVYFKAGKYKRAIDSLSKAVRL HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC KGDEAKYHCLLGYSLYGEGYANGDEKLIRRALKELQLSVEIDKDIPNKEKEYHYYMANIL CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHH YELEDYEKALKEVNEALKFDNSPLVHKLKGDILFQLKKYNEAIEEYRTNLNDDKNLYAIA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE YTYFTIGKYEQALEYYDRAIGVNPEDPYHYEGKARTLIFMEKINEAYETIKKAIDIDPDN EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PYIKLTEIEVLAEIDKRRVTKVLTEYLEETEEYREVICEESKERKFKEKTRELIEEILVK CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FC CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA