Definition Sulfolobus islandicus M.14.25 chromosome, complete genome.
Accession NC_012588
Length 2,608,832

Click here to switch to the map view.

The map label for this gene is 227828810

Identifier: 227828810

GI number: 227828810

Start: 2403927

End: 2404679

Strand: Direct

Name: 227828810

Synonym: M1425_2584

Alternate gene names: NA

Gene position: 2403927-2404679 (Clockwise)

Preceding gene: 227828809

Following gene: 227828812

Centisome position: 92.15

GC content: 34.0

Gene sequence:

>753_bases
ATGAAAGTGCTTGATGTAGTAAATCCTATTGTAATAACTGTTTTCCCAGAGTCCTCCTTAAAGGAGGCAATTGATATACT
TTCCAATAATCCAACAGGTAGAATTGTTGTTTTGAAGGAGGAAAAGCCTATTGGAATGGTTTCTACTAGGGATGTTGTTG
CCTCTTTCAGCGAATACGGGACTAATATATACGATTTAAAGGTTAAGGATATAATGAGTAAGGATTTAATTACTGTCTCG
CCCAATGATGACGTCAATCATGTAGTTAGAATAATGTTAATGAACAATATTGGAGGAATTCCAGTAGTTGATAATAACGC
TATTGTGGGTATTTTTACTGAAAGAGAGGTCTTGAAACTAATAGCATCCTCGATGTTCTCTGGATTAGTTGATTCCGTGA
TGTCAAGTAACGTAGTATCCATAGGTGAGGAAAGCACAATATTAGAAGCTGCCAAACTAATGGCCATGAATAACGTGAGG
AGATTACCAGTATTTAGCAAGAATAACAAACTGATTGGCATAATTACTGCAGCTGATATAGTTAAATATCTAGCTAAGAA
TAAAAACATAGGAAAAGTCCTAGATGCTGGTACTAAAAACCCAATAACTATTAGCAGATATTACAGTATATTAAATGCGG
CTAAATTGATGATAGAAAAGAGAATAGGCACATTACCAGTTATGGAAAATCAAAAATTAGTTGGAATAGTTACTGAAAGA
GACCTTATGTATGCATACATTAACATAGTATAA

Upstream 100 bases:

>100_bases
AAGTGATTATAGGGAATTGTTGAGAAATGTGGAGAAGGTAGGGAAAAGCACAAGAGTCGTCATTTGAAACTTTTTTAACT
ATCATGACAATATATTATAT

Downstream 100 bases:

>100_bases
AAACTTTTTTAATTATTTATTTTTGGCCTCCATTATTAGCTAGCTTTTCCGTATCTGTACTTCTCCAAGGCTCTGCGTTT
TCCTTAAACTCAATTCTCTT

Product: signal transduction protein with CBS domains

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKVLDVVNPIVITVFPESSLKEAIDILSNNPTGRIVVLKEEKPIGMVSTRDVVASFSEYGTNIYDLKVKDIMSKDLITVS
PNDDVNHVVRIMLMNNIGGIPVVDNNAIVGIFTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVR
RLPVFSKNNKLIGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMENQKLVGIVTER
DLMYAYINIV

Sequences:

>Translated_250_residues
MKVLDVVNPIVITVFPESSLKEAIDILSNNPTGRIVVLKEEKPIGMVSTRDVVASFSEYGTNIYDLKVKDIMSKDLITVS
PNDDVNHVVRIMLMNNIGGIPVVDNNAIVGIFTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVR
RLPVFSKNNKLIGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMENQKLVGIVTER
DLMYAYINIV
>Mature_250_residues
MKVLDVVNPIVITVFPESSLKEAIDILSNNPTGRIVVLKEEKPIGMVSTRDVVASFSEYGTNIYDLKVKDIMSKDLITVS
PNDDVNHVVRIMLMNNIGGIPVVDNNAIVGIFTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVR
RLPVFSKNNKLIGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMENQKLVGIVTER
DLMYAYINIV

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 27471; Mature: 27471

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLDVVNPIVITVFPESSLKEAIDILSNNPTGRIVVLKEEKPIGMVSTRDVVASFSEYG
CCHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHC
TNIYDLKVKDIMSKDLITVSPNDDVNHVVRIMLMNNIGGIPVVDNNAIVGIFTEREVLKL
CEEEEEEHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCEEECCCEEEEEECHHHHHHH
IASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKLIGIITAADI
HHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCEECCEEECCCCEEEEEEHHHH
VKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMENQKLVGIVTER
HHHHHCCCCCCHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
DLMYAYINIV
CEEEEEEEEC
>Mature Secondary Structure
MKVLDVVNPIVITVFPESSLKEAIDILSNNPTGRIVVLKEEKPIGMVSTRDVVASFSEYG
CCHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHC
TNIYDLKVKDIMSKDLITVSPNDDVNHVVRIMLMNNIGGIPVVDNNAIVGIFTEREVLKL
CEEEEEEHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCEEECCCEEEEEECHHHHHHH
IASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKLIGIITAADI
HHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCEECCEEECCCCEEEEEEHHHH
VKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMENQKLVGIVTER
HHHHHCCCCCCHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
DLMYAYINIV
CEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]