| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is yeeF [C]
Identifier: 227828397
GI number: 227828397
Start: 1958588
End: 1959928
Strand: Direct
Name: yeeF [C]
Synonym: M1425_2140
Alternate gene names: 227828397
Gene position: 1958588-1959928 (Clockwise)
Preceding gene: 227828396
Following gene: 227828398
Centisome position: 75.08
GC content: 33.04
Gene sequence:
>1341_bases ATGAGTACTTCGTCACTCAGCAAAGCTCAACAAAGCCAAGAACCAAAAAGACATTTAGGCTTTATTGATATCGTTTTCCT TTCAATGGGTTCTCAAGCACCCTTTCTGAGTATTCTGACATATGGTGTAGAGGCGTTTATTATTGCCGGCTTCTTAGCTC CAATAGCTATTATCTTAGGTACCCTACTAGTCTTATTAAATGGATTTGTAGTTTATGAACTTTCAAAGAGATTTACCAAA GCTGGTGGTTATTATACATACGCATTCTATTCTTTAACAAAGCGTTTAGGTTTCGAGACTGGATGGCTCTATGTACTGTA TTCAACTACATACGGTGTTGCATATGTTTTTGGAACTACGTACATAATATATCATATTTTAGGGGTAAATCCATGGATAA TAGGGCTAGGTCTATTATCGATTGCATCCTTGTTTGCCATAATGGGTATAAAGATTAGTACAAAGTACGCTGTTTTTACA AGCTTGTTAGAAATAGGTATTATGACTATTCTTGCAATAGTATTTTTAAGCTCTACTGGATTTCACTTGTATAATCCATT ATCCTTTCATGTAAGCCTAGGAACTTTAGCATATGCTATTCTATTCGGTTCCAGTATACCTACTGGATATGGATCAATAA CACCAGTTTCTGGCGAAGCTAAAGATGCTAAAAAGACAATCAGTAGAGCAATTATAACAGTTATCTTACTAGGAGGATTG CTAGCTGCATTCGATATTTATGCAATAGGTGATCATTTATTATTCTATAAGATATCTGCAAATAATGTTGATATTTTGCA TCTAATAGAAAATAAATTTGGTCTTATTACGTTTATATTTGTTTTATTTGCAGCTATAAACGATGGTATCTTAGGTAGTT TAGGCTTTATAATAGCAACGTCTAGGACAATCTTCGCAATGTCTTATACTAATCTCTTACCTAAAGTTTTCAGCAAGTTT GAAAGTTACAAAGGTCCTACTAACGCTGTGGTATTGTCAGTCCTATTATACTTTTTGACTTCACTTTTAGGTTTATATTT TATAAATAATCCATTTCTTGCATTTGGAGTCCTAGGAACTATAGCATTGTTTTCAAGTCTGTTTGTACACGTAGCGGCTA ATTTCTCGTTAATAAAAATTTCAATTAAAAAGTTTAGAAAGAGACTGTTGCAAATTATAATTGGGATTTCTGCTGTAATA TTCAGTGTATTTGAGCTAGTGAATTCTATATCTTCTGCATCTCCTATAGAAGTATATATCTTTATGTCATTCATAATAAT AGGTTTTCTAGCAGCGGAGACGTTAAGTATGATAGAAGAGGAAAATGAAGAAGAAGAATAG
Upstream 100 bases:
>100_bases TCATTATTTAGACTAGTTAAAAAGATAAATATTCTAAAGTAATTTTTTACCTATATAAGGGAAAGAGTTTAAATAATAGT CGTAGAAAAGTGATTTTCGG
Downstream 100 bases:
>100_bases GTTTGCAATGAGTTTATATAATGTGAAAATTTTAATATCAATTGATGCTTAAAAAAGCCGTAATCACATCTGCTGGAAAA GGTAGTAGGATGAAACATAT
Product: amino acid permease-associated region
Products: NA
Alternate protein names: Amino Acid Permease; Transporter Protein; Amino Acid Permease-Associated Protein; Amino Acid Transporter Related Protein; Amino Acid Transporter; Amino Acid Permease Related Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSTSSLSKAQQSQEPKRHLGFIDIVFLSMGSQAPFLSILTYGVEAFIIAGFLAPIAIILGTLLVLLNGFVVYELSKRFTK AGGYYTYAFYSLTKRLGFETGWLYVLYSTTYGVAYVFGTTYIIYHILGVNPWIIGLGLLSIASLFAIMGIKISTKYAVFT SLLEIGIMTILAIVFLSSTGFHLYNPLSFHVSLGTLAYAILFGSSIPTGYGSITPVSGEAKDAKKTISRAIITVILLGGL LAAFDIYAIGDHLLFYKISANNVDILHLIENKFGLITFIFVLFAAINDGILGSLGFIIATSRTIFAMSYTNLLPKVFSKF ESYKGPTNAVVLSVLLYFLTSLLGLYFINNPFLAFGVLGTIALFSSLFVHVAANFSLIKISIKKFRKRLLQIIIGISAVI FSVFELVNSISSASPIEVYIFMSFIIIGFLAAETLSMIEEENEEEE
Sequences:
>Translated_446_residues MSTSSLSKAQQSQEPKRHLGFIDIVFLSMGSQAPFLSILTYGVEAFIIAGFLAPIAIILGTLLVLLNGFVVYELSKRFTK AGGYYTYAFYSLTKRLGFETGWLYVLYSTTYGVAYVFGTTYIIYHILGVNPWIIGLGLLSIASLFAIMGIKISTKYAVFT SLLEIGIMTILAIVFLSSTGFHLYNPLSFHVSLGTLAYAILFGSSIPTGYGSITPVSGEAKDAKKTISRAIITVILLGGL LAAFDIYAIGDHLLFYKISANNVDILHLIENKFGLITFIFVLFAAINDGILGSLGFIIATSRTIFAMSYTNLLPKVFSKF ESYKGPTNAVVLSVLLYFLTSLLGLYFINNPFLAFGVLGTIALFSSLFVHVAANFSLIKISIKKFRKRLLQIIIGISAVI FSVFELVNSISSASPIEVYIFMSFIIIGFLAAETLSMIEEENEEEE >Mature_445_residues STSSLSKAQQSQEPKRHLGFIDIVFLSMGSQAPFLSILTYGVEAFIIAGFLAPIAIILGTLLVLLNGFVVYELSKRFTKA GGYYTYAFYSLTKRLGFETGWLYVLYSTTYGVAYVFGTTYIIYHILGVNPWIIGLGLLSIASLFAIMGIKISTKYAVFTS LLEIGIMTILAIVFLSSTGFHLYNPLSFHVSLGTLAYAILFGSSIPTGYGSITPVSGEAKDAKKTISRAIITVILLGGLL AAFDIYAIGDHLLFYKISANNVDILHLIENKFGLITFIFVLFAAINDGILGSLGFIIATSRTIFAMSYTNLLPKVFSKFE SYKGPTNAVVLSVLLYFLTSLLGLYFINNPFLAFGVLGTIALFSSLFVHVAANFSLIKISIKKFRKRLLQIIIGISAVIF SVFELVNSISSASPIEVYIFMSFIIIGFLAAETLSMIEEENEEEE
Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48845; Mature: 48714
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSLSKAQQSQEPKRHLGFIDIVFLSMGSQAPFLSILTYGVEAFIIAGFLAPIAIILG CCCCHHHHHHHHCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLVLLNGFVVYELSKRFTKAGGYYTYAFYSLTKRLGFETGWLYVLYSTTYGVAYVFGTT HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH YIIYHILGVNPWIIGLGLLSIASLFAIMGIKISTKYAVFTSLLEIGIMTILAIVFLSSTG HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCC FHLYNPLSFHVSLGTLAYAILFGSSIPTGYGSITPVSGEAKDAKKTISRAIITVILLGGL CEEECCHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAAFDIYAIGDHLLFYKISANNVDILHLIENKFGLITFIFVLFAAINDGILGSLGFIIAT HHHHHHHHCCCEEEEEEEECCCEEEEEEHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHC SRTIFAMSYTNLLPKVFSKFESYKGPTNAVVLSVLLYFLTSLLGLYFINNPFLAFGVLGT CCHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IALFSSLFVHVAANFSLIKISIKKFRKRLLQIIIGISAVIFSVFELVNSISSASPIEVYI HHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FMSFIIIGFLAAETLSMIEEENEEEE HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STSSLSKAQQSQEPKRHLGFIDIVFLSMGSQAPFLSILTYGVEAFIIAGFLAPIAIILG CCCHHHHHHHHCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLVLLNGFVVYELSKRFTKAGGYYTYAFYSLTKRLGFETGWLYVLYSTTYGVAYVFGTT HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH YIIYHILGVNPWIIGLGLLSIASLFAIMGIKISTKYAVFTSLLEIGIMTILAIVFLSSTG HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCC FHLYNPLSFHVSLGTLAYAILFGSSIPTGYGSITPVSGEAKDAKKTISRAIITVILLGGL CEEECCHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAAFDIYAIGDHLLFYKISANNVDILHLIENKFGLITFIFVLFAAINDGILGSLGFIIAT HHHHHHHHCCCEEEEEEEECCCEEEEEEHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHC SRTIFAMSYTNLLPKVFSKFESYKGPTNAVVLSVLLYFLTSLLGLYFINNPFLAFGVLGT CCHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IALFSSLFVHVAANFSLIKISIKKFRKRLLQIIIGISAVIFSVFELVNSISSASPIEVYI HHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FMSFIIIGFLAAETLSMIEEENEEEE HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA