| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828324
Identifier: 227828324
GI number: 227828324
Start: 1893004
End: 1894005
Strand: Direct
Name: 227828324
Synonym: M1425_2066
Alternate gene names: NA
Gene position: 1893004-1894005 (Clockwise)
Preceding gene: 227828323
Following gene: 227828328
Centisome position: 72.56
GC content: 33.23
Gene sequence:
>1002_bases ATGAATAGGATATTACTGACTGTTTCTGCATTGGTTAAGGATAATTTAAGAAATAGATTCGTAATCTTCTGGATAATAAT ATTTCCTATTATCATAACGTTACTATTCGGTCTCGTATTTGGGGGTTTTAGTAGTTATTTTCACGTTACTGTTGCAGTGG AGGGAGATTATGGTCTAGCCAAGTATCTTAATACCACTGAGATATTTCAAGGATTAACTAACGTAAGTCTAAAATACGCA GTAGAGCATGACTATGTTTACGTCAAGGTGAATGGGTCTAGTTTCACAATATATACCAGTAAGCAAAATCAAGAGTTTGT ACCAGTATTAGAGTCAGTTATTGACCAGTATTATCAAAAGGTTAATAATACACGTGACTTCACAGTTTTACAAATATCAG GATATACTTATTATTATTATTTAATATCTGGAATAATAGGGATAATATCACTCTCTAATGGAATACTTAGTACGATAGGA GTTTCGGCTAGTTATTTCAGAGATAGGATAATCGAAAGATTAGCTACATCTCCATTAAAGAGTTATGAGTGGGTGATCTC ACTAATAATCTATGTGATAATTATAACACTAATTTCCACAGCTGCAGTAATAATTCTGGGAATTCTATTTGGTTTTATAC CAATAATAGGTATAGAGTTCTTGGGATTCTTAGTAATCTCAACCTTATTATTTGGTGGCCTAGGGGCAATAATCTACGGA TTAACACCAAAGGATAAGATATTTCTTTCAGAGATAGTGGCTAACGTTCTAGTATTTCCGCTAATGTTCTTGAGTAATGC CTTCTTCCCTCCTAACGTATATCCGCCGATAGTAAGAATATTTGTAGAATACCAACCATTATCTGTAATTATAACAATTA TACGAGATTTAATAGTATACGGTGTATCGCCAAATCCCATATTAGTCTCCATAGTTTTCTTCTTTACCGTACTCTTCCTT TATGCGGGAGGACGACTTTTAAAGTTAAGAGAAATTGACTAA
Upstream 100 bases:
>100_bases AAAGTTTCCACTGCAAACGAGATAATGGCAGAATTTAAGACTAGTAATTTGGAAGATGCTTATCTAGAATTAATTAAGTC TTTAGAGGATGGTGAGAATA
Downstream 100 bases:
>100_bases AACCAGGGTGGGTTGGTCTTATTAATAAAGCTTAATAGTCCCTCTCTTGCTTCTTCACTCTGGATTTGTATAATAAGATC ATTAAAAGCTTTATCAATGT
Product: ABC transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNRILLTVSALVKDNLRNRFVIFWIIIFPIIITLLFGLVFGGFSSYFHVTVAVEGDYGLAKYLNTTEIFQGLTNVSLKYA VEHDYVYVKVNGSSFTIYTSKQNQEFVPVLESVIDQYYQKVNNTRDFTVLQISGYTYYYYLISGIIGIISLSNGILSTIG VSASYFRDRIIERLATSPLKSYEWVISLIIYVIIITLISTAAVIILGILFGFIPIIGIEFLGFLVISTLLFGGLGAIIYG LTPKDKIFLSEIVANVLVFPLMFLSNAFFPPNVYPPIVRIFVEYQPLSVIITIIRDLIVYGVSPNPILVSIVFFFTVLFL YAGGRLLKLREID
Sequences:
>Translated_333_residues MNRILLTVSALVKDNLRNRFVIFWIIIFPIIITLLFGLVFGGFSSYFHVTVAVEGDYGLAKYLNTTEIFQGLTNVSLKYA VEHDYVYVKVNGSSFTIYTSKQNQEFVPVLESVIDQYYQKVNNTRDFTVLQISGYTYYYYLISGIIGIISLSNGILSTIG VSASYFRDRIIERLATSPLKSYEWVISLIIYVIIITLISTAAVIILGILFGFIPIIGIEFLGFLVISTLLFGGLGAIIYG LTPKDKIFLSEIVANVLVFPLMFLSNAFFPPNVYPPIVRIFVEYQPLSVIITIIRDLIVYGVSPNPILVSIVFFFTVLFL YAGGRLLKLREID >Mature_333_residues MNRILLTVSALVKDNLRNRFVIFWIIIFPIIITLLFGLVFGGFSSYFHVTVAVEGDYGLAKYLNTTEIFQGLTNVSLKYA VEHDYVYVKVNGSSFTIYTSKQNQEFVPVLESVIDQYYQKVNNTRDFTVLQISGYTYYYYLISGIIGIISLSNGILSTIG VSASYFRDRIIERLATSPLKSYEWVISLIIYVIIITLISTAAVIILGILFGFIPIIGIEFLGFLVISTLLFGGLGAIIYG LTPKDKIFLSEIVANVLVFPLMFLSNAFFPPNVYPPIVRIFVEYQPLSVIITIIRDLIVYGVSPNPILVSIVFFFTVLFL YAGGRLLKLREID
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37522; Mature: 37522
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILLTVSALVKDNLRNRFVIFWIIIFPIIITLLFGLVFGGFSSYFHVTVAVEGDYGLA CCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHH KYLNTTEIFQGLTNVSLKYAVEHDYVYVKVNGSSFTIYTSKQNQEFVPVLESVIDQYYQK HHCCHHHHHHHHHCCEEEEEEECCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHH VNNTRDFTVLQISGYTYYYYLISGIIGIISLSNGILSTIGVSASYFRDRIIERLATSPLK HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCHH SYEWVISLIIYVIIITLISTAAVIILGILFGFIPIIGIEFLGFLVISTLLFGGLGAIIYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTPKDKIFLSEIVANVLVFPLMFLSNAFFPPNVYPPIVRIFVEYQPLSVIITIIRDLIVY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC GVSPNPILVSIVFFFTVLFLYAGGRLLKLREID CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MNRILLTVSALVKDNLRNRFVIFWIIIFPIIITLLFGLVFGGFSSYFHVTVAVEGDYGLA CCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHH KYLNTTEIFQGLTNVSLKYAVEHDYVYVKVNGSSFTIYTSKQNQEFVPVLESVIDQYYQK HHCCHHHHHHHHHCCEEEEEEECCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHH VNNTRDFTVLQISGYTYYYYLISGIIGIISLSNGILSTIGVSASYFRDRIIERLATSPLK HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCHH SYEWVISLIIYVIIITLISTAAVIILGILFGFIPIIGIEFLGFLVISTLLFGGLGAIIYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTPKDKIFLSEIVANVLVFPLMFLSNAFFPPNVYPPIVRIFVEYQPLSVIITIIRDLIVY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC GVSPNPILVSIVFFFTVLFLYAGGRLLKLREID CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA