Click here to switch to the map view.

The map label for this gene is metN [C]

Identifier: 227828233

GI number: 227828233

Start: 1808429

End: 1809553

Strand: Direct

Name: metN [C]

Synonym: M1425_1971

Alternate gene names: 227828233

Gene position: 1808429-1809553 (Clockwise)

Preceding gene: 227828232

Following gene: 227828245

Centisome position: 69.32

GC content: 33.33

Gene sequence:

>1125_bases
ATGCTTATCAGTAGTCCTAAATATTTAAACGGAAAGATAGAGATTGAAAAAGGAGAAAGAGTAGGTTTAGTAGGTAAGAA
CGGAAGCGGAAAAACTACATTAATATTATCCACATTATGCATAGATCAGACTACCTTTAATAACGTTATAGTTGATGATA
TGGACTTCTGCAAAGAGAAGGATTATTCAAGAATCTCAGCAGTTTTACAAGACGTTTCTTCTCAAATATTGGCTTCAACA
TGCAAGGATGAAATCGAGTTAATGAAAAGATTCCATAGGGTAGATGATAAAATAGCTAGAAAGTTAATGGGTAATTACTA
TGAGGGCGAGTTCAATAAATTGTCGGACGGATATAAAAAGAGGTACGCTATCGCTTCAGTTTTAGCTTCAAATCCCGAAT
ATATCTTACTGGACGAGCCATTTGCAAACTTAGATGATGAAGGAGTAAGGTTGGTTAGTGAAATAATTCCTAAAAACAGT
TTGATTGCTGAACATCGTATTGACGAATTGCGCAAATTAGTAGATAGGGTCTACATGATTAAGAATAATACGGAAATAAA
TGAAATATCCAAGGAAAAACTTTTCGATACGGAATTCTTGAGGAAAGAAGGATTAAGAGGATTTAGTTTACCTAAGATTA
ACAGTGAATTGGGTAATGAAATATTTAATGTAACTGTTGATAATTATACGATAAAAATAAGAGAAAGGGAAATTTTGTGT
TTATTAGGCAGAAACGGAAGTGGTAAAACTACTATTCTCAGAAAACTATTTAGGAAAATCTTCGTAATTTTTCAAGAAGT
AGACTTACAATTCTTTGATTTTACCGTAAAGGAGATTGTAGGAAGTAAATATGCTTTATCTTTATTTAAGTTAGAAAGTT
TGGCAGATAGAAGTCCCTATGCTCTAAGTTTCGGTCAAAAAATGAGGGTTCTGATAGCATCAGCCTTTTCTTCAGACTCT
AAAGTAATAGGCTTAGATGAGCCTAGTATAGGAATGGATGGAGAAGCATTACTTTCGTTTTACGAAATGGTGAAAGTTCT
TAAGGAGCAAAGACGAGGCTTAATTCTCGCTACGCATGATAAAGATATAATGAATCTATGTGACACCCGCATAGTTATAG
ATTAA

Upstream 100 bases:

>100_bases
TTGCATATACTGTTAAGTTGTTCGGTAAGTATAATTATAAGAGAAATTTAAAACCTTCAAGAGAAGATTTAATACTTCTA
CTTATAGGTGTAGCCGCATT

Downstream 100 bases:

>100_bases
ATAGCTAGAAACCGTTTACTTTATATATTATTTATAGTAGTTTTTATTGATGGGCCCGTAGCTTAGCCAGGTAGAGCGAC
GGGCTCTTAACCATGTAAGA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MLISSPKYLNGKIEIEKGERVGLVGKNGSGKTTLILSTLCIDQTTFNNVIVDDMDFCKEKDYSRISAVLQDVSSQILAST
CKDEIELMKRFHRVDDKIARKLMGNYYEGEFNKLSDGYKKRYAIASVLASNPEYILLDEPFANLDDEGVRLVSEIIPKNS
LIAEHRIDELRKLVDRVYMIKNNTEINEISKEKLFDTEFLRKEGLRGFSLPKINSELGNEIFNVTVDNYTIKIREREILC
LLGRNGSGKTTILRKLFRKIFVIFQEVDLQFFDFTVKEIVGSKYALSLFKLESLADRSPYALSFGQKMRVLIASAFSSDS
KVIGLDEPSIGMDGEALLSFYEMVKVLKEQRRGLILATHDKDIMNLCDTRIVID

Sequences:

>Translated_374_residues
MLISSPKYLNGKIEIEKGERVGLVGKNGSGKTTLILSTLCIDQTTFNNVIVDDMDFCKEKDYSRISAVLQDVSSQILAST
CKDEIELMKRFHRVDDKIARKLMGNYYEGEFNKLSDGYKKRYAIASVLASNPEYILLDEPFANLDDEGVRLVSEIIPKNS
LIAEHRIDELRKLVDRVYMIKNNTEINEISKEKLFDTEFLRKEGLRGFSLPKINSELGNEIFNVTVDNYTIKIREREILC
LLGRNGSGKTTILRKLFRKIFVIFQEVDLQFFDFTVKEIVGSKYALSLFKLESLADRSPYALSFGQKMRVLIASAFSSDS
KVIGLDEPSIGMDGEALLSFYEMVKVLKEQRRGLILATHDKDIMNLCDTRIVID
>Mature_374_residues
MLISSPKYLNGKIEIEKGERVGLVGKNGSGKTTLILSTLCIDQTTFNNVIVDDMDFCKEKDYSRISAVLQDVSSQILAST
CKDEIELMKRFHRVDDKIARKLMGNYYEGEFNKLSDGYKKRYAIASVLASNPEYILLDEPFANLDDEGVRLVSEIIPKNS
LIAEHRIDELRKLVDRVYMIKNNTEINEISKEKLFDTEFLRKEGLRGFSLPKINSELGNEIFNVTVDNYTIKIREREILC
LLGRNGSGKTTILRKLFRKIFVIFQEVDLQFFDFTVKEIVGSKYALSLFKLESLADRSPYALSFGQKMRVLIASAFSSDS
KVIGLDEPSIGMDGEALLSFYEMVKVLKEQRRGLILATHDKDIMNLCDTRIVID

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789593, Length=220, Percent_Identity=29.0909090909091, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 42628; Mature: 42628

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISSPKYLNGKIEIEKGERVGLVGKNGSGKTTLILSTLCIDQTTFNNVIVDDMDFCKEK
CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEHHHCCHHCCCEEECCHHHHHCC
DYSRISAVLQDVSSQILASTCKDEIELMKRFHRVDDKIARKLMGNYYEGEFNKLSDGYKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RYAIASVLASNPEYILLDEPFANLDDEGVRLVSEIIPKNSLIAEHRIDELRKLVDRVYMI
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KNNTEINEISKEKLFDTEFLRKEGLRGFSLPKINSELGNEIFNVTVDNYTIKIREREILC
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCEEEEEECCEEEE
LLGRNGSGKTTILRKLFRKIFVIFQEVDLQFFDFTVKEIVGSKYALSLFKLESLADRSPY
EEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
ALSFGQKMRVLIASAFSSDSKVIGLDEPSIGMDGEALLSFYEMVKVLKEQRRGLILATHD
EECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
KDIMNLCDTRIVID
HHHHHHCCCCEEEC
>Mature Secondary Structure
MLISSPKYLNGKIEIEKGERVGLVGKNGSGKTTLILSTLCIDQTTFNNVIVDDMDFCKEK
CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEHHHCCHHCCCEEECCHHHHHCC
DYSRISAVLQDVSSQILASTCKDEIELMKRFHRVDDKIARKLMGNYYEGEFNKLSDGYKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RYAIASVLASNPEYILLDEPFANLDDEGVRLVSEIIPKNSLIAEHRIDELRKLVDRVYMI
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KNNTEINEISKEKLFDTEFLRKEGLRGFSLPKINSELGNEIFNVTVDNYTIKIREREILC
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCEEEEEECCEEEE
LLGRNGSGKTTILRKLFRKIFVIFQEVDLQFFDFTVKEIVGSKYALSLFKLESLADRSPY
EEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
ALSFGQKMRVLIASAFSSDSKVIGLDEPSIGMDGEALLSFYEMVKVLKEQRRGLILATHD
EECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
KDIMNLCDTRIVID
HHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA