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The map label for this gene is 227828123

Identifier: 227828123

GI number: 227828123

Start: 1709496

End: 1709990

Strand: Direct

Name: 227828123

Synonym: M1425_1861

Alternate gene names: NA

Gene position: 1709496-1709990 (Clockwise)

Preceding gene: 227828119

Following gene: 227828124

Centisome position: 65.53

GC content: 32.53

Gene sequence:

>495_bases
ATGCAAGCTAATAGTGAAGAATACTGTGAATTATGTGGATCTCCAATTCATGGTAAAGGTATAACTGTGTCATATGAAGG
CTCAATTATTACTGTATGTAATTCATGTTACAATAGAATAAGAAAGCATGCAGTGATAGTAAAAGAGGATAATAAGAAAA
GTGAAACACAAAAGAAAACCACTCCTAAACCGCCTAAAATGGCAGATACTGAATTAGAAATTGTAGCAGACTATTACAAG
ATTATTAAAAATGCTAGAGAACAATTGGGTATCTCACAACAACAATTAGCACAGAAATTAAAAGTATCGGAAAATATCGT
TAAAAGATTTGAAAGTGGTAAATTGAAGCCTACAATCTCTCAAGCCAGACAGCTAGAGAAAATTCTTGGTATTAAGCTAG
TTACCCCATTAGAAAATGAAGAAAGCGAGAAAGAATTCGATGAAACAGAATTAACCTTAGGGGATGTAGTTAATATTAAA
GAGGGAAAGAAGTGA

Upstream 100 bases:

>100_bases
CCCTTATTGTGTCAAAATCTCCGGACAATTTAACTCGTATATATACTTGTTTGACATAGACTAAAAATGTTTAATACAAG
TATTTACAATAGGTATCTAT

Downstream 100 bases:

>100_bases
AAAGTGCAGTTCTTTTTGTATCTGAAGAATTTAAGGAAGAGGCAATCGCGTTAGTTGAGGGGGCTAACTACAAGATAGTT
AGGATTTACAAATTACCAAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQANSEEYCELCGSPIHGKGITVSYEGSIITVCNSCYNRIRKHAVIVKEDNKKSETQKKTTPKPPKMADTELEIVADYYK
IIKNAREQLGISQQQLAQKLKVSENIVKRFESGKLKPTISQARQLEKILGIKLVTPLENEESEKEFDETELTLGDVVNIK
EGKK

Sequences:

>Translated_164_residues
MQANSEEYCELCGSPIHGKGITVSYEGSIITVCNSCYNRIRKHAVIVKEDNKKSETQKKTTPKPPKMADTELEIVADYYK
IIKNAREQLGISQQQLAQKLKVSENIVKRFESGKLKPTISQARQLEKILGIKLVTPLENEESEKEFDETELTLGDVVNIK
EGKK
>Mature_164_residues
MQANSEEYCELCGSPIHGKGITVSYEGSIITVCNSCYNRIRKHAVIVKEDNKKSETQKKTTPKPPKMADTELEIVADYYK
IIKNAREQLGISQQQLAQKLKVSENIVKRFESGKLKPTISQARQLEKILGIKLVTPLENEESEKEFDETELTLGDVVNIK
EGKK

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 18511; Mature: 18511

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANSEEYCELCGSPIHGKGITVSYEGSIITVCNSCYNRIRKHAVIVKEDNKKSETQKKT
CCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHCC
TPKPPKMADTELEIVADYYKIIKNAREQLGISQQQLAQKLKVSENIVKRFESGKLKPTIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QARQLEKILGIKLVTPLENEESEKEFDETELTLGDVVNIKEGKK
HHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MQANSEEYCELCGSPIHGKGITVSYEGSIITVCNSCYNRIRKHAVIVKEDNKKSETQKKT
CCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHCC
TPKPPKMADTELEIVADYYKIIKNAREQLGISQQQLAQKLKVSENIVKRFESGKLKPTIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QARQLEKILGIKLVTPLENEESEKEFDETELTLGDVVNIKEGKK
HHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]