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The map label for this gene is 227828114

Identifier: 227828114

GI number: 227828114

Start: 1702326

End: 1702748

Strand: Direct

Name: 227828114

Synonym: M1425_1852

Alternate gene names: NA

Gene position: 1702326-1702748 (Clockwise)

Preceding gene: 227828111

Following gene: 227828115

Centisome position: 65.25

GC content: 27.9

Gene sequence:

>423_bases
ATGAAAACAATAACTTTTATGGGGAATATACTTATTTTTGATAATGTGACTATAATGTCTGAGAAAGCTGAAACTACTTT
AGAGAAGATATATTTAGCATTAAGCTCATCTAAACAGTTACCTAGTGAGATCATTTATCTTGTAAATTGGGATAAAGTTG
ATGTATTTGTTGACTTAAAGCAGAGAGGAAGAGTTACAATTGACGGTATAGATGAACAATCGCTTATAATAAAGGACAAG
GAAAATGGAAAATATACTGCTATGGTTTTAATAGTAGATGAAAATGAAAAGGTAAGTTTTAAGAAAATATTAGATAAACT
ACATCAGTCGAAATCAATGAATTTAGAACTTTATCTTTCAATTGTTGATAAATATGGGGATGTAACATATTACACAATAT
CTGAGATAAAAATGTCAAAGTGA

Upstream 100 bases:

>100_bases
AGTAAATATTATCAATAATTATACCACAATTACTACATACAACTTCCCCGTTTTTATTATCCCAAACTATTTCGTTTGAA
CCACATACAGGACATTCCAT

Downstream 100 bases:

>100_bases
CTTAACATGACAAAATTTGAAACAGTAAGAGGTATGAAAGACTATATTGGAATCGATGCAGAAAAAATTAGATATTTAGA
ATCTACCTTCAGAGACTTAG

Product: tRNA-splicing endonuclease subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKTITFMGNILIFDNVTIMSEKAETTLEKIYLALSSSKQLPSEIIYLVNWDKVDVFVDLKQRGRVTIDGIDEQSLIIKDK
ENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLSIVDKYGDVTYYTISEIKMSK

Sequences:

>Translated_140_residues
MKTITFMGNILIFDNVTIMSEKAETTLEKIYLALSSSKQLPSEIIYLVNWDKVDVFVDLKQRGRVTIDGIDEQSLIIKDK
ENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLSIVDKYGDVTYYTISEIKMSK
>Mature_140_residues
MKTITFMGNILIFDNVTIMSEKAETTLEKIYLALSSSKQLPSEIIYLVNWDKVDVFVDLKQRGRVTIDGIDEQSLIIKDK
ENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLSIVDKYGDVTYYTISEIKMSK

Specific function: Unknown

COG id: COG1676

COG function: function code J; tRNA splicing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16141; Mature: 16141

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTITFMGNILIFDNVTIMSEKAETTLEKIYLALSSSKQLPSEIIYLVNWDKVDVFVDLK
CCEEEEECCEEEEECEEEEECHHHHHHHHHEEEECCCCCCCCCEEEEEECCEEEEEEEEC
QRGRVTIDGIDEQSLIIKDKENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLS
CCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEE
IVDKYGDVTYYTISEIKMSK
EECCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MKTITFMGNILIFDNVTIMSEKAETTLEKIYLALSSSKQLPSEIIYLVNWDKVDVFVDLK
CCEEEEECCEEEEECEEEEECHHHHHHHHHEEEECCCCCCCCCEEEEEECCEEEEEEEEC
QRGRVTIDGIDEQSLIIKDKENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLS
CCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEE
IVDKYGDVTYYTISEIKMSK
EECCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA