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The map label for this gene is rps17E

Identifier: 227828108

GI number: 227828108

Start: 1697557

End: 1697796

Strand: Direct

Name: rps17E

Synonym: M1425_1846

Alternate gene names: 227828108

Gene position: 1697557-1697796 (Clockwise)

Preceding gene: 227828107

Following gene: 227828109

Centisome position: 65.07

GC content: 27.92

Gene sequence:

>240_bases
ATGGGTAATATATACACTAAAGATATAAAAAGAATAGTAAAGGAGATATATAACCAATATAAAGATGAAATAAAAGATGA
TTATAATACAAATAAACAAATAGTTGTTAGGTATGTTGATGTAAAGTCAAAGAAAGTGAGGAACAGAATAGCGGGATATC
TTACAAGGTATTATAAAATCATGAAAGAAAAAGAGACTTCTCCAACTGAAGAGAAGGAGGAAATATCAGAAGAGATCTAG

Upstream 100 bases:

>100_bases
ATAGAGAAGTTGAAGAATAGATTTAAGAAAGAGACAGATATGTATAAAACTAAACCAAGCGTATATTCACACGAAAGTTC
GCATGAATAAGGTGATTCAA

Downstream 100 bases:

>100_bases
AATGCCGAAAGTGATATTAAAGGGACCACTAGTTTCTCAACTTAATTGCAGAGAAATAGACGTCAGTGATAAAGAACTTT
TCAATATATTACTGAAGATA

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MGNIYTKDIKRIVKEIYNQYKDEIKDDYNTNKQIVVRYVDVKSKKVRNRIAGYLTRYYKIMKEKETSPTEEKEEISEEI

Sequences:

>Translated_79_residues
MGNIYTKDIKRIVKEIYNQYKDEIKDDYNTNKQIVVRYVDVKSKKVRNRIAGYLTRYYKIMKEKETSPTEEKEEISEEI
>Mature_78_residues
GNIYTKDIKRIVKEIYNQYKDEIKDDYNTNKQIVVRYVDVKSKKVRNRIAGYLTRYYKIMKEKETSPTEEKEEISEEI

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_SULIA (C3MZH2)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843849.1
- ProteinModelPortal:   C3MZH2
- GeneID:   7813011
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1933
- OMA:   TRDFEHN
- ProtClustDB:   PRK01151
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 9615; Mature: 9484

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIYTKDIKRIVKEIYNQYKDEIKDDYNTNKQIVVRYVDVKSKKVRNRIAGYLTRYYKI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKEKETSPTEEKEEISEEI
HHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
GNIYTKDIKRIVKEIYNQYKDEIKDDYNTNKQIVVRYVDVKSKKVRNRIAGYLTRYYKI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKEKETSPTEEKEEISEEI
HHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA