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The map label for this gene is 227827866

Identifier: 227827866

GI number: 227827866

Start: 1488258

End: 1488413

Strand: Direct

Name: 227827866

Synonym: M1425_1601

Alternate gene names: NA

Gene position: 1488258-1488413 (Clockwise)

Preceding gene: 227827863

Following gene: 227827872

Centisome position: 57.05

GC content: 33.33

Gene sequence:

>156_bases
ATGCCAGTTGAAGAAGTTGTAAAGGTTTCTCGTAACTATCAAGTAACAATACCAGCAAAAGTAAGACAGAAATTCCCAGT
AAAGGAAGGAGATTTAGTTAAGGTAATTTACGATGAAAACGAAGGAGTTGTAAAGATTCAGATTTTAAAGAGCTAA

Upstream 100 bases:

>100_bases
ATTAATGCATTATATATTTAATAGGCCTTAATAGTTTCAAGGATTGTCTTTTCTTAGAGTTTGATAAAATATTTAAACCT
TCTTTTACTAATACATTTTT

Downstream 100 bases:

>100_bases
AACCAATTTAATAAATCATATATTTTTTCCATGAACATCCTCTTATTTATTTCATAAACTATTTCAGCATTAGGTTTGTC
AGACCAGCTAGTGTCGGCAT

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MPVEEVVKVSRNYQVTIPAKVRQKFPVKEGDLVKVIYDENEGVVKIQILKS

Sequences:

>Translated_51_residues
MPVEEVVKVSRNYQVTIPAKVRQKFPVKEGDLVKVIYDENEGVVKIQILKS
>Mature_50_residues
PVEEVVKVSRNYQVTIPAKVRQKFPVKEGDLVKVIYDENEGVVKIQILKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 5842; Mature: 5711

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVEEVVKVSRNYQVTIPAKVRQKFPVKEGDLVKVIYDENEGVVKIQILKS
CCHHHHHHHCCCEEEEECHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure 
PVEEVVKVSRNYQVTIPAKVRQKFPVKEGDLVKVIYDENEGVVKIQILKS
CHHHHHHHCCCEEEEECHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726; 9720912 [H]