| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827849
Identifier: 227827849
GI number: 227827849
Start: 1472287
End: 1472697
Strand: Direct
Name: 227827849
Synonym: M1425_1582
Alternate gene names: NA
Gene position: 1472287-1472697 (Clockwise)
Preceding gene: 227827848
Following gene: 227827856
Centisome position: 56.43
GC content: 33.09
Gene sequence:
>411_bases ATGAGCGAACCATCCTATTTCGTAAGCTTTTGGTTAAGAAAAATACTAGTACCAGTAGATGGTTCTGAGAACAGTTTAAG AGCTCTGGATCTTGCAGTAGACTTCGGTATGAGATACGGTTCAAAGATAACCATAATACATATATGTAGTGACTGTAACA ATACCAACGATATACAATCGCTTATTGAAAAAAGGGTAAATAACAAGATCGAATATGATTTAAAAATAGTTAAGATTAAC ATTAAAGAGTCCAGTGTTTCAAATGAAATTTTGAAAGTAATAAATGAGGAACCTTATGATGCAGTAATAATGGGTGCAAG AGGAACTTCATTGAATAGTGATATAAATATAGGCTCTACAGCTCTAGCAATATCGATCAATGCTCCAGTCTCTGTAATAT TAGTCAGATGA
Upstream 100 bases:
>100_bases AAAATGTGGATGCAATAAGGGCCTCCACTAGATTAATGAGTGCAGAAGACTCAATAAGAATTACAAATGAAAGTTTAGGA ATATTAAAGGGGTACCTAAT
Downstream 100 bases:
>100_bases TTAATTTTAATGATTTAGAAGAATATTTTTCTAGATCTTTCATATCGTCAAATGTATACTTAACCTCTAAGAAATTCTTC CTCATGTCGATTACCTCTTT
Product: UspA domain protein
Products: NA
Alternate protein names: UspA Domain Protein; Stress Protein
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSEPSYFVSFWLRKILVPVDGSENSLRALDLAVDFGMRYGSKITIIHICSDCNNTNDIQSLIEKRVNNKIEYDLKIVKIN IKESSVSNEILKVINEEPYDAVIMGARGTSLNSDINIGSTALAISINAPVSVILVR
Sequences:
>Translated_136_residues MSEPSYFVSFWLRKILVPVDGSENSLRALDLAVDFGMRYGSKITIIHICSDCNNTNDIQSLIEKRVNNKIEYDLKIVKIN IKESSVSNEILKVINEEPYDAVIMGARGTSLNSDINIGSTALAISINAPVSVILVR >Mature_135_residues SEPSYFVSFWLRKILVPVDGSENSLRALDLAVDFGMRYGSKITIIHICSDCNNTNDIQSLIEKRVNNKIEYDLKIVKINI KESSVSNEILKVINEEPYDAVIMGARGTSLNSDINIGSTALAISINAPVSVILVR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15060; Mature: 14928
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPSYFVSFWLRKILVPVDGSENSLRALDLAVDFGMRYGSKITIIHICSDCNNTNDIQS CCCCHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHH LIEKRVNNKIEYDLKIVKINIKESSVSNEILKVINEEPYDAVIMGARGTSLNSDINIGST HHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCE ALAISINAPVSVILVR EEEEEECCCEEEEEEC >Mature Secondary Structure SEPSYFVSFWLRKILVPVDGSENSLRALDLAVDFGMRYGSKITIIHICSDCNNTNDIQS CCCHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHH LIEKRVNNKIEYDLKIVKINIKESSVSNEILKVINEEPYDAVIMGARGTSLNSDINIGST HHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCE ALAISINAPVSVILVR EEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA