| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827720
Identifier: 227827720
GI number: 227827720
Start: 1355033
End: 1355899
Strand: Direct
Name: 227827720
Synonym: M1425_1449
Alternate gene names: NA
Gene position: 1355033-1355899 (Clockwise)
Preceding gene: 227827719
Following gene: 227827721
Centisome position: 51.94
GC content: 34.6
Gene sequence:
>867_bases TTGGATTGCATTGGGAACCACAGTATTCTCACTAATAACTTATATAGCTTCGCAAGTGGGATCATGAGTAGTGGATATTC TCCATTCTATATACTTTACATAGCGATGAATATAGCTACATTAACATACACTATTGGCTCATTATTTTATGGCTTGCCAA TTCCTATCTATGGCTTGAAGAAATGGGGACCTAGAATGATGAGTGATGCAATATATGCAGCTGTTTGGATAAACATATAT GGCGTTATAATTTTTGCCATAGGTCAGATTCAAAGTTTACTTGGAGTAGATTGGGGTAGTTTCTTTTCCTCAATTTTACA GTTACAAGCTAATATGTTTAGTGCACTCATTCAAGTGAAGAGTATATATTATATTATTACTACTGAAAAGATATCAATGG CTCTTGCTCTTCTTGCAGATCCGCTACTTCAGTTTTCATCTTTTATTACCGATATAATATTTTTATTGCAGTTCTTTATC GATCTTGGGGAATTCATACAACAATCCTATATGATACTTATAGCAATTGGTATTCTTTTATTATCACTTCCTTTTAGGAT AGGCAAGGGTATAGGTGGGACTTTAATATCGTCCGCAATTACCTTTTATATCGGTTTGCCGTATTTACCGGTTTTTATTC AAGAAATGTCCTCTACATCATTGGCTCAAATAGGTTCTCAATTATCCACAATTACGGATGTAAACACATTGGTTGCGACA ATAGCGGGCATAGTTCCTGAACTTGTAATTATATTCATAATAATACCCATGCTTTATTTGAGTATTTTAGCTGGCATATC GTTAGGATTAGGAAATGCAATTGGAGGCTCCAGTGGTAGAGTTCCATTTCCATTAGACCTATTTTAG
Upstream 100 bases:
>100_bases CATGGGCTGTTGGATGGGCATTAAGAGGTGCACCAATACCTATTTTCAGAGTTAAAAGAACAGGTCAAGACTTAATTGAA GATGCAATATTGGCTGCATT
Downstream 100 bases:
>100_bases GAGATGGAAAGTGAAAAGCAGTAATTTGATGATAATATTGATATTAATAGATAGTATCCTAGCCTTTATATATTCAAAAA ACGATTACGTTATCATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MDCIGNHSILTNNLYSFASGIMSSGYSPFYILYIAMNIATLTYTIGSLFYGLPIPIYGLKKWGPRMMSDAIYAAVWINIY GVIIFAIGQIQSLLGVDWGSFFSSILQLQANMFSALIQVKSIYYIITTEKISMALALLADPLLQFSSFITDIIFLLQFFI DLGEFIQQSYMILIAIGILLLSLPFRIGKGIGGTLISSAITFYIGLPYLPVFIQEMSSTSLAQIGSQLSTITDVNTLVAT IAGIVPELVIIFIIIPMLYLSILAGISLGLGNAIGGSSGRVPFPLDLF
Sequences:
>Translated_288_residues MDCIGNHSILTNNLYSFASGIMSSGYSPFYILYIAMNIATLTYTIGSLFYGLPIPIYGLKKWGPRMMSDAIYAAVWINIY GVIIFAIGQIQSLLGVDWGSFFSSILQLQANMFSALIQVKSIYYIITTEKISMALALLADPLLQFSSFITDIIFLLQFFI DLGEFIQQSYMILIAIGILLLSLPFRIGKGIGGTLISSAITFYIGLPYLPVFIQEMSSTSLAQIGSQLSTITDVNTLVAT IAGIVPELVIIFIIIPMLYLSILAGISLGLGNAIGGSSGRVPFPLDLF >Mature_288_residues MDCIGNHSILTNNLYSFASGIMSSGYSPFYILYIAMNIATLTYTIGSLFYGLPIPIYGLKKWGPRMMSDAIYAAVWINIY GVIIFAIGQIQSLLGVDWGSFFSSILQLQANMFSALIQVKSIYYIITTEKISMALALLADPLLQFSSFITDIIFLLQFFI DLGEFIQQSYMILIAIGILLLSLPFRIGKGIGGTLISSAITFYIGLPYLPVFIQEMSSTSLAQIGSQLSTITDVNTLVAT IAGIVPELVIIFIIIPMLYLSILAGISLGLGNAIGGSSGRVPFPLDLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31347; Mature: 31347
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCIGNHSILTNNLYSFASGIMSSGYSPFYILYIAMNIATLTYTIGSLFYGLPIPIYGLK CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH KWGPRMMSDAIYAAVWINIYGVIIFAIGQIQSLLGVDWGSFFSSILQLQANMFSALIQVK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH SIYYIITTEKISMALALLADPLLQFSSFITDIIFLLQFFIDLGEFIQQSYMILIAIGILL HHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLPFRIGKGIGGTLISSAITFYIGLPYLPVFIQEMSSTSLAQIGSQLSTITDVNTLVAT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IAGIVPELVIIFIIIPMLYLSILAGISLGLGNAIGGSSGRVPFPLDLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDCIGNHSILTNNLYSFASGIMSSGYSPFYILYIAMNIATLTYTIGSLFYGLPIPIYGLK CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH KWGPRMMSDAIYAAVWINIYGVIIFAIGQIQSLLGVDWGSFFSSILQLQANMFSALIQVK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH SIYYIITTEKISMALALLADPLLQFSSFITDIIFLLQFFIDLGEFIQQSYMILIAIGILL HHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLPFRIGKGIGGTLISSAITFYIGLPYLPVFIQEMSSTSLAQIGSQLSTITDVNTLVAT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IAGIVPELVIIFIIIPMLYLSILAGISLGLGNAIGGSSGRVPFPLDLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA