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The map label for this gene is pfdB

Identifier: 227827682

GI number: 227827682

Start: 1328750

End: 1329130

Strand: Direct

Name: pfdB

Synonym: M1425_1411

Alternate gene names: 227827682

Gene position: 1328750-1329130 (Clockwise)

Preceding gene: 227827681

Following gene: 227827683

Centisome position: 50.93

GC content: 33.07

Gene sequence:

>381_bases
GTGGCCGAGAAATTACCTCCAGAAGTTCAAGCTCAACTAGCTAAGTTTCAACAGTTAAAAGATCAGCTTGATAGATTATT
ATTGGAAAAGTCTACTATAGAGAATGAATTAAGGGAGATAAACAAGGTATTGGAAGAATTATCAGTTCTTAATGCAGATG
CTACTATTTATAAGATTGTAGGGAATTTATTGGTTAAATCGGATAAGACATCAGTAGAAAAGGAGCTTAATGATAGGAAA
GAATTGTTAGAACTCAGATCAAGGACTTATCAGAAGCAAGAAAGTATTTTAAGAAAGCAGCTAGAAGACTTACAAGCTAA
AATAAATGAGATGTTATCGAAATATTATCCGCAAGGTGGCCAAACAGGTATAAAAGCTTAA

Upstream 100 bases:

>100_bases
GAGATAGATGCACCATCAATTACAAGAGCTAGGGCTATAATGAACTCTTATATACTTTGGATCTATACAATTCTAAAGTC
ACTGGAAGAGGTGGAAAAAA

Downstream 100 bases:

>100_bases
GCTAAATAACTTATTAGTGTTATGGTAATTAGAATTTATGCTGATGATAGGGAAAAGGCTAGTGGTATACCAGAATTATT
AAAGGATTTGGGAATTACAG

Product: prefoldin subunit beta

Products: NA

Alternate protein names: GimC subunit beta

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAEKLPPEVQAQLAKFQQLKDQLDRLLLEKSTIENELREINKVLEELSVLNADATIYKIVGNLLVKSDKTSVEKELNDRK
ELLELRSRTYQKQESILRKQLEDLQAKINEMLSKYYPQGGQTGIKA

Sequences:

>Translated_126_residues
MAEKLPPEVQAQLAKFQQLKDQLDRLLLEKSTIENELREINKVLEELSVLNADATIYKIVGNLLVKSDKTSVEKELNDRK
ELLELRSRTYQKQESILRKQLEDLQAKINEMLSKYYPQGGQTGIKA
>Mature_125_residues
AEKLPPEVQAQLAKFQQLKDQLDRLLLEKSTIENELREINKVLEELSVLNADATIYKIVGNLLVKSDKTSVEKELNDRKE
LLELRSRTYQKQESILRKQLEDLQAKINEMLSKYYPQGGQTGIKA

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDB_SULIA (C3N5R8)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843388.1
- GeneID:   7814228
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1461
- OMA:   ELPPQIQ
- ProtClustDB:   PRK09343
- HAMAP:   MF_00307
- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053
- TIGRFAMs:   TIGR02338

Pfam domain/function: PF01920 Prefoldin_2; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 14557; Mature: 14426

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKLPPEVQAQLAKFQQLKDQLDRLLLEKSTIENELREINKVLEELSVLNADATIYKIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GNLLVKSDKTSVEKELNDRKELLELRSRTYQKQESILRKQLEDLQAKINEMLSKYYPQGG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QTGIKA
CCCCCC
>Mature Secondary Structure 
AEKLPPEVQAQLAKFQQLKDQLDRLLLEKSTIENELREINKVLEELSVLNADATIYKIV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GNLLVKSDKTSVEKELNDRKELLELRSRTYQKQESILRKQLEDLQAKINEMLSKYYPQGG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QTGIKA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA