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The map label for this gene is 227827672

Identifier: 227827672

GI number: 227827672

Start: 1323012

End: 1323572

Strand: Direct

Name: 227827672

Synonym: M1425_1401

Alternate gene names: NA

Gene position: 1323012-1323572 (Clockwise)

Preceding gene: 227827671

Following gene: 227827673

Centisome position: 50.71

GC content: 31.37

Gene sequence:

>561_bases
TTGTTAGTAGTAGAATCATGCATTCTAAACTCTAGGCTGTTTCCTTACGTCAAAAGGTTAGGATATAACATGGTTTTTAG
TGAAGATGGTTTGGTTGGTATAAAAAGGGTTACTATAAAAGCGGAAAATGGGAATCAATTGAAAAAGATGCTTAAGAAGC
CTTTTATTGAGAGAGATGTATTAGTTTTTGTAAAACCCCTTTCAATAGATGCCTTAAAGTATGCTATTATCAACAAAAGG
GTCAATGCTGTGATATTGGCTGATGATAATATGAGGATATTTAAGAAAAGTATGCTAAACCTATTAAGATCTTATGACAA
ATTCGTTGAAGTTTCACTTAAATCTTCTAGCGGGTTATTATATAATGCTATAGTGTTTGCATATAAATGGATACCTAACA
TTATTTTCTCCTCATATGCAAGTGATTTTAACGAGATCTGGAGTCCAATCTCTAAAATAAGTTATTTGACCGTATTGGGA
GCTGATGAAGAGGAAGCTTATAAGTTTGTTATATTAAATCCCATAAAGTTGTTGAATGAACTCAATTCAACTAATAATTG
A

Upstream 100 bases:

>100_bases
GCCGAGCGTAGACTTGTTCTTAAAGAGGGTGATGATGTCGTTAAATGTATGATTTCGTTTAATACTTCTTTGGAGAATAT
AAAGGAGGAGATAAAGAAGC

Downstream 100 bases:

>100_bases
CATTATATTAATATTATGGCTTCTCATATTAACTGTATTATATCTCAGAAAAAAGAGCTTAAACCTTAATATTGTGAAAA
ATAAGAAAATAGTAAGAGCT

Product: RNase P subunit p30

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLVVESCILNSRLFPYVKRLGYNMVFSEDGLVGIKRVTIKAENGNQLKKMLKKPFIERDVLVFVKPLSIDALKYAIINKR
VNAVILADDNMRIFKKSMLNLLRSYDKFVEVSLKSSSGLLYNAIVFAYKWIPNIIFSSYASDFNEIWSPISKISYLTVLG
ADEEEAYKFVILNPIKLLNELNSTNN

Sequences:

>Translated_186_residues
MLVVESCILNSRLFPYVKRLGYNMVFSEDGLVGIKRVTIKAENGNQLKKMLKKPFIERDVLVFVKPLSIDALKYAIINKR
VNAVILADDNMRIFKKSMLNLLRSYDKFVEVSLKSSSGLLYNAIVFAYKWIPNIIFSSYASDFNEIWSPISKISYLTVLG
ADEEEAYKFVILNPIKLLNELNSTNN
>Mature_186_residues
MLVVESCILNSRLFPYVKRLGYNMVFSEDGLVGIKRVTIKAENGNQLKKMLKKPFIERDVLVFVKPLSIDALKYAIINKR
VNAVILADDNMRIFKKSMLNLLRSYDKFVEVSLKSSSGLLYNAIVFAYKWIPNIIFSSYASDFNEIWSPISKISYLTVLG
ADEEEAYKFVILNPIKLLNELNSTNN

Specific function: Unknown

COG id: COG1603

COG function: function code J; RNase P/RNase MRP subunit p30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21301; Mature: 21301

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVESCILNSRLFPYVKRLGYNMVFSEDGLVGIKRVTIKAENGNQLKKMLKKPFIERDV
CEEEHHHHHCCHHHHHHHHCCCCEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCE
LVFVKPLSIDALKYAIINKRVNAVILADDNMRIFKKSMLNLLRSYDKFVEVSLKSSSGLL
EEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
YNAIVFAYKWIPNIIFSSYASDFNEIWSPISKISYLTVLGADEEEAYKFVILNPIKLLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCEEEEEECHHHHHHH
LNSTNN
HCCCCC
>Mature Secondary Structure
MLVVESCILNSRLFPYVKRLGYNMVFSEDGLVGIKRVTIKAENGNQLKKMLKKPFIERDV
CEEEHHHHHCCHHHHHHHHCCCCEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCE
LVFVKPLSIDALKYAIINKRVNAVILADDNMRIFKKSMLNLLRSYDKFVEVSLKSSSGLL
EEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
YNAIVFAYKWIPNIIFSSYASDFNEIWSPISKISYLTVLGADEEEAYKFVILNPIKLLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCEEEEEECHHHHHHH
LNSTNN
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA