| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is fbpC1 [H]
Identifier: 227827467
GI number: 227827467
Start: 1118945
End: 1119559
Strand: Direct
Name: fbpC1 [H]
Synonym: M1425_1188
Alternate gene names: 227827467
Gene position: 1118945-1119559 (Clockwise)
Preceding gene: 227827466
Following gene: 227827476
Centisome position: 42.89
GC content: 30.08
Gene sequence:
>615_bases TTGAGTGAGATAGTTAAAGTAGATGTTTTTAAGAAATTTAAAAATTTTGAGCTAAGAGTAAATTTCAGTGTAAATGAGGG AGAGAAAGTTTTAATTCAAGGTCCAAATGGTTCTGGTAAGACTACTTTACTATATCTAATTTATGGCGTGTTAAATCCAG ATTCTGGATACGTAAGGGTATTTAATAAGAATCCAAGTGTAGAGCTAAGAAAAAGTGAAATGTACATGCTAGAGGAGTAT TTAATATTTCTAGAAAATGCTAGTTTAAAGGAAAACTTAGAGTTCATAACGTCATTAAGGGATTTTAATATAAATAAAAC AGAGGAGCTAATTAATAAATTCGATCTACCTCTTTATAAGAAATCTTACCAACTAAGTTCTGGTCAGAGAAGGTTATTTA AATTAGCTTTAGCCTTCTCTTCCGAGGCCAAATTACTACTACTTGACGAGCCTACATCTAATTTAGATATAGAAAATTCT AAAATAGTCAAGGATATAATAAGAGAGTACAACGGTACAGTAATTTTCGCCTCTCATGATCTTCTGCTCAAAGAATCATG TGATAAAACAATATATTTAAGAACAGGAAAAATAGAGCGAATTGAGATTAAATAA
Upstream 100 bases:
>100_bases GCTGGACTAATTGGATTATTAGTATCTTCTATTTTGATTGAGTACTATACGGTGTTTTCTGCTTACAGTAATCAGCACAA ATTCCTAAAGGTGAGGAGTA
Downstream 100 bases:
>100_bases TTTATAAAGTGCAGTTTTTATTATTCATTGTTTCTTTAATAGAAATACGTGAATTTGATATATTTATTACATTATGGTAT ATATAATCGCCTTAATTTAA
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSEIVKVDVFKKFKNFELRVNFSVNEGEKVLIQGPNGSGKTTLLYLIYGVLNPDSGYVRVFNKNPSVELRKSEMYMLEEY LIFLENASLKENLEFITSLRDFNINKTEELINKFDLPLYKKSYQLSSGQRRLFKLALAFSSEAKLLLLDEPTSNLDIENS KIVKDIIREYNGTVIFASHDLLLKESCDKTIYLRTGKIERIEIK
Sequences:
>Translated_204_residues MSEIVKVDVFKKFKNFELRVNFSVNEGEKVLIQGPNGSGKTTLLYLIYGVLNPDSGYVRVFNKNPSVELRKSEMYMLEEY LIFLENASLKENLEFITSLRDFNINKTEELINKFDLPLYKKSYQLSSGQRRLFKLALAFSSEAKLLLLDEPTSNLDIENS KIVKDIIREYNGTVIFASHDLLLKESCDKTIYLRTGKIERIEIK >Mature_203_residues SEIVKVDVFKKFKNFELRVNFSVNEGEKVLIQGPNGSGKTTLLYLIYGVLNPDSGYVRVFNKNPSVELRKSEMYMLEEYL IFLENASLKENLEFITSLRDFNINKTEELINKFDLPLYKKSYQLSSGQRRLFKLALAFSSEAKLLLLDEPTSNLDIENSK IVKDIIREYNGTVIFASHDLLLKESCDKTIYLRTGKIERIEIK
Specific function: Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system [H]
COG id: COG1136
COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=201, Percent_Identity=27.8606965174129, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI116734710, Length=171, Percent_Identity=27.4853801169591, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI105990541, Length=173, Percent_Identity=27.7456647398844, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI27262624, Length=184, Percent_Identity=28.804347826087, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI27262626, Length=184, Percent_Identity=28.804347826087, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI45446740, Length=184, Percent_Identity=25, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI47078218, Length=184, Percent_Identity=25, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21536376, Length=175, Percent_Identity=26.2857142857143, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI90421313, Length=197, Percent_Identity=26.3959390862944, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI27436953, Length=178, Percent_Identity=27.5280898876405, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI255708477, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI73747915, Length=198, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=7e-12, Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI42741659, Length=202, Percent_Identity=27.2277227722772, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI27477115, Length=196, Percent_Identity=25, Blast_Score=64, Evalue=7e-11, Organism=Escherichia coli, GI87081834, Length=197, Percent_Identity=31.4720812182741, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786703, Length=197, Percent_Identity=28.4263959390863, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=27.1844660194175, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787089, Length=200, Percent_Identity=26.5, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1790467, Length=202, Percent_Identity=29.2079207920792, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081709, Length=174, Percent_Identity=28.1609195402299, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790534, Length=169, Percent_Identity=28.9940828402367, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=29.5, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1787712, Length=197, Percent_Identity=29.9492385786802, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87081782, Length=202, Percent_Identity=28.7128712871287, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1789593, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=27.4774774774775, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI1787792, Length=204, Percent_Identity=24.0196078431373, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=30.6532663316583, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787029, Length=198, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787105, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=6e-13, Organism=Escherichia coli, GI1786563, Length=174, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788450, Length=177, Percent_Identity=25.4237288135593, Blast_Score=66, Evalue=1e-12, Organism=Escherichia coli, GI48994943, Length=208, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI48994883, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789873, Length=177, Percent_Identity=28.2485875706215, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI48995001, Length=194, Percent_Identity=24.2268041237113, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1789751, Length=182, Percent_Identity=27.4725274725275, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71992290, Length=200, Percent_Identity=29, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25146777, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71988343, Length=194, Percent_Identity=28.8659793814433, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17559834, Length=177, Percent_Identity=28.2485875706215, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17569143, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996809, Length=200, Percent_Identity=30.5, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646699, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17565586, Length=144, Percent_Identity=29.8611111111111, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17569145, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17558664, Length=163, Percent_Identity=31.9018404907975, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17567265, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17565938, Length=201, Percent_Identity=24.8756218905473, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193211017, Length=200, Percent_Identity=30, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193211015, Length=200, Percent_Identity=30, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115534520, Length=202, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17511077, Length=202, Percent_Identity=26.7326732673267, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17569081, Length=202, Percent_Identity=27.7227722772277, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555318, Length=181, Percent_Identity=26.5193370165746, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17567269, Length=194, Percent_Identity=28.3505154639175, Blast_Score=63, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6320874, Length=188, Percent_Identity=30.3191489361702, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320339, Length=219, Percent_Identity=26.027397260274, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=217, Percent_Identity=26.7281105990783, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=191, Percent_Identity=26.7015706806283, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321752, Length=211, Percent_Identity=25.1184834123223, Blast_Score=62, Evalue=5e-11, Organism=Drosophila melanogaster, GI24641342, Length=188, Percent_Identity=32.4468085106383, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24642252, Length=188, Percent_Identity=31.9148936170213, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI18859989, Length=188, Percent_Identity=31.9148936170213, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24648314, Length=177, Percent_Identity=27.683615819209, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574150, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007328, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363262, Length=198, Percent_Identity=30.3030303030303, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24653245, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI28574259, Length=191, Percent_Identity=29.8429319371728, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI85726357, Length=161, Percent_Identity=31.055900621118, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552353, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552351, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583969, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552359, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552355, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552339, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550972, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552349, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552343, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552341, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552357, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552335, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552347, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552337, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552345, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552361, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552363, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI221512771, Length=171, Percent_Identity=27.4853801169591, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015853 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: =3.6.3.30 [H]
Molecular weight: Translated: 23624; Mature: 23492
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIVKVDVFKKFKNFELRVNFSVNEGEKVLIQGPNGSGKTTLLYLIYGVLNPDSGYVRV CCCEEEEHHHHHCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEEEEEEECCCCCEEEE FNKNPSVELRKSEMYMLEEYLIFLENASLKENLEFITSLRDFNINKTEELINKFDLPLYK ECCCCCEEEEHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEE KSYQLSSGQRRLFKLALAFSSEAKLLLLDEPTSNLDIENSKIVKDIIREYNGTVIFASHD CCCCCCCCHHHHEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC LLLKESCDKTIYLRTGKIERIEIK EEECCCCCCEEEEECCCEEEEEEC >Mature Secondary Structure SEIVKVDVFKKFKNFELRVNFSVNEGEKVLIQGPNGSGKTTLLYLIYGVLNPDSGYVRV CCEEEEHHHHHCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEEEEEEECCCCCEEEE FNKNPSVELRKSEMYMLEEYLIFLENASLKENLEFITSLRDFNINKTEELINKFDLPLYK ECCCCCEEEEHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEE KSYQLSSGQRRLFKLALAFSSEAKLLLLDEPTSNLDIENSKIVKDIIREYNGTVIFASHD CCCCCCCCHHHHEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC LLLKESCDKTIYLRTGKIERIEIK EEECCCCCCEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA