Click here to switch to the map view.

The map label for this gene is 227827318

Identifier: 227827318

GI number: 227827318

Start: 980679

End: 981068

Strand: Direct

Name: 227827318

Synonym: M1425_1035

Alternate gene names: NA

Gene position: 980679-981068 (Clockwise)

Preceding gene: 227827316

Following gene: 227827319

Centisome position: 37.59

GC content: 37.69

Gene sequence:

>390_bases
ATGAGAGAAGAAGCAGAAAAATGGTTCAGACAAGCCTTAGAAGATTTAGCAACTGCTAAAGATACTATTACAACTGGTCA
CTATTATGCTTCAGCCTTTTGGGCCGAACAAGCTGCTGAGAAAGCTCTAAAAGCACTCTTAATAGCGGGAGGAAAGATCG
AGAGGACTCATGACTTAAATGAGTTGTTAGAGATAATAAAGGAAGAGATAGGATTATCCGTAGAGGAGATAAGAAGTGAA
GTAATCAAACTTACTTTGCACTATACTATCTCTAGATATCCTGATGCTGCAAATACTGTACCATATTCGTTGTATAGTAA
GGAAGATGCTGAGGAGTTAGTAAAAAAAGCGGAAAAGGTGATAGAATGGGTAAAGCGAAATCTGCATTAA

Upstream 100 bases:

>100_bases
CCACTCTGGATGGGAACCCTCACCCTTCCAGGGTGGGGAGGAAGTCAGACTCCTTTTTAGGATAGTTACGATTAAAAGGC
CTAGATGCTAATCTAAACTG

Downstream 100 bases:

>100_bases
AAAGTCAAGTTGAATTGGTAAAAGTCGCAATAGAATTTATTAATGATATAAGTAATGAAATTAGAATTGAAGATATATAC
GTAGTGGGTTCTAGGGCCAG

Product: HEPN domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MREEAEKWFRQALEDLATAKDTITTGHYYASAFWAEQAAEKALKALLIAGGKIERTHDLNELLEIIKEEIGLSVEEIRSE
VIKLTLHYTISRYPDAANTVPYSLYSKEDAEELVKKAEKVIEWVKRNLH

Sequences:

>Translated_129_residues
MREEAEKWFRQALEDLATAKDTITTGHYYASAFWAEQAAEKALKALLIAGGKIERTHDLNELLEIIKEEIGLSVEEIRSE
VIKLTLHYTISRYPDAANTVPYSLYSKEDAEELVKKAEKVIEWVKRNLH
>Mature_129_residues
MREEAEKWFRQALEDLATAKDTITTGHYYASAFWAEQAAEKALKALLIAGGKIERTHDLNELLEIIKEEIGLSVEEIRSE
VIKLTLHYTISRYPDAANTVPYSLYSKEDAEELVKKAEKVIEWVKRNLH

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14834; Mature: 14834

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREEAEKWFRQALEDLATAKDTITTGHYYASAFWAEQAAEKALKALLIAGGKIERTHDLN
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHH
ELLEIIKEEIGLSVEEIRSEVIKLTLHYTISRYPDAANTVPYSLYSKEDAEELVKKAEKV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHH
IEWVKRNLH
HHHHHHCCC
>Mature Secondary Structure
MREEAEKWFRQALEDLATAKDTITTGHYYASAFWAEQAAEKALKALLIAGGKIERTHDLN
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHH
ELLEIIKEEIGLSVEEIRSEVIKLTLHYTISRYPDAANTVPYSLYSKEDAEELVKKAEKV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHH
IEWVKRNLH
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA