| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827295
Identifier: 227827295
GI number: 227827295
Start: 949271
End: 950680
Strand: Direct
Name: 227827295
Synonym: M1425_1005
Alternate gene names: NA
Gene position: 949271-950680 (Clockwise)
Preceding gene: 227827292
Following gene: 227827296
Centisome position: 36.39
GC content: 34.18
Gene sequence:
>1410_bases ATGAACCCTATAAAGAATACGTTGAAGACCCTCAGCGTTATTACTACTAATGTTATAATAGCTTTAATCTTCTTCATTAT TACAGCTAAGATCACTAACCCAGAATTCTTCGGAAAAGTTGCAATAATTCAACTTCTCGAAGTGATTACTTCTATGTTCT TTTACTTTATTCCCGGCCAAATAATAACTAGGGAAATATCTTACCTTTACGCAAGGAAAGAGCTTAATAGAAAAGTAATA GGAAAGTTTCTTTCTTTTCCTTTTCTGACTTTACTAGTTTTTCTTATCCTTCTCATCTTTCCAAATTACGTTAAGTTAGT AATACCTTACCTATTCCTTTACTTACTTAATAACGTTATGAGTTATATAATGTACGGAATGGATATGTTTACTGAAGGAG CAATAACCGGAAACCTCTTTCTAATTATTAGGTGGGGAATATCAATAATAGCAGTCCTCTCCCATAATATTTACATTTTC ATTGAAATATGGACTTTAGGGGGAATTCTCTCTGTCTCAATGAATTATGCTTTTCTCAGTAGGAAAGTAGGGTTAATTTT ACCTTCTTTTGATTTTGCCTTTCTATTTAAGCACTTCAAGGAAGGTTTACCTCTTTATCTATATTCCTCAGCATATTTTC TTTCTTCACAAGGAGACAGAGTAACCACTGCTTATTTATTAGGCTCCTACTACCTAGGTTTGTATCAATTTTCTGCTTTA GTAGCTGGAGTACCTTCGATGATTTTAGGCGCATTAAATAACGTTTTGTTACCTACAGCATCGTTTTATAAGGCATTAGG AAAAGACGAGAAGAAAATGTCGTCAATTTCTTTTCGCTTGCTGTCCTTAATTACCTTTCTCGCTGTCATTATTTCTATAC CTATAGCCGTTTTAGTTGTTAACAAGTTCTTCCCGACTTACAGTTCAGCTGTTGAAGTTTTAATTCTTCTCCTTTTGGCA ATTACTCTTCCTTTTCCCATAGGTTCTTTAACGAACTTCATCATAGCTGCTAAGAAATCGTTAAGACCGTTTCTACTACT TTCCCTACTTAACGGTAGCCTAGTTTTGTTGACCTCCTACTTATTAATTCCTAGAATTGGAATAATGGGTGGTGCAATTT CACAACTCGTGGTATCAATTATTTCCTCTATTTTCATTATAGTTTACGCACTGAAAGAAAACGTTTTTGTTTTGGGTAGA AAAGAGGCTGTTTTGTTAACTTCAATACCTTTGATAGGCCTTTATGAGGTTTTCGTTGACCCTCCGTACTTAGACTTCCT TCTCCTCCTTTTAGTCATCTTACTTTTTAAAACGTTTAAGGTGATAGAAAAGGGAGATGTGAAATTAGTTGAATCGTTTT TGCCGTCTAAACTTAAGTTCATATCTTATATTCTGGAGTTAATGAGCTGA
Upstream 100 bases:
>100_bases CCTCACTAGCTTAAGGCAGAATTTATACCTAAACTGACTACACTTTCAGATACCACTGAAAGAAAAGCTTTAATATTTTC CTTCTGAAGACCTAAACTGA
Downstream 100 bases:
>100_bases ATTTTAACTCGTCGATCAACTTTGTTTAGTATGTAAATTTCAGATCTTATTTTTAAAAAATTTTTTGATAATATAAATCA TTAGACATTGATGTGTTGAC
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Related Protein
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MNPIKNTLKTLSVITTNVIIALIFFIITAKITNPEFFGKVAIIQLLEVITSMFFYFIPGQIITREISYLYARKELNRKVI GKFLSFPFLTLLVFLILLIFPNYVKLVIPYLFLYLLNNVMSYIMYGMDMFTEGAITGNLFLIIRWGISIIAVLSHNIYIF IEIWTLGGILSVSMNYAFLSRKVGLILPSFDFAFLFKHFKEGLPLYLYSSAYFLSSQGDRVTTAYLLGSYYLGLYQFSAL VAGVPSMILGALNNVLLPTASFYKALGKDEKKMSSISFRLLSLITFLAVIISIPIAVLVVNKFFPTYSSAVEVLILLLLA ITLPFPIGSLTNFIIAAKKSLRPFLLLSLLNGSLVLLTSYLLIPRIGIMGGAISQLVVSIISSIFIIVYALKENVFVLGR KEAVLLTSIPLIGLYEVFVDPPYLDFLLLLLVILLFKTFKVIEKGDVKLVESFLPSKLKFISYILELMS
Sequences:
>Translated_469_residues MNPIKNTLKTLSVITTNVIIALIFFIITAKITNPEFFGKVAIIQLLEVITSMFFYFIPGQIITREISYLYARKELNRKVI GKFLSFPFLTLLVFLILLIFPNYVKLVIPYLFLYLLNNVMSYIMYGMDMFTEGAITGNLFLIIRWGISIIAVLSHNIYIF IEIWTLGGILSVSMNYAFLSRKVGLILPSFDFAFLFKHFKEGLPLYLYSSAYFLSSQGDRVTTAYLLGSYYLGLYQFSAL VAGVPSMILGALNNVLLPTASFYKALGKDEKKMSSISFRLLSLITFLAVIISIPIAVLVVNKFFPTYSSAVEVLILLLLA ITLPFPIGSLTNFIIAAKKSLRPFLLLSLLNGSLVLLTSYLLIPRIGIMGGAISQLVVSIISSIFIIVYALKENVFVLGR KEAVLLTSIPLIGLYEVFVDPPYLDFLLLLLVILLFKTFKVIEKGDVKLVESFLPSKLKFISYILELMS >Mature_469_residues MNPIKNTLKTLSVITTNVIIALIFFIITAKITNPEFFGKVAIIQLLEVITSMFFYFIPGQIITREISYLYARKELNRKVI GKFLSFPFLTLLVFLILLIFPNYVKLVIPYLFLYLLNNVMSYIMYGMDMFTEGAITGNLFLIIRWGISIIAVLSHNIYIF IEIWTLGGILSVSMNYAFLSRKVGLILPSFDFAFLFKHFKEGLPLYLYSSAYFLSSQGDRVTTAYLLGSYYLGLYQFSAL VAGVPSMILGALNNVLLPTASFYKALGKDEKKMSSISFRLLSLITFLAVIISIPIAVLVVNKFFPTYSSAVEVLILLLLA ITLPFPIGSLTNFIIAAKKSLRPFLLLSLLNGSLVLLTSYLLIPRIGIMGGAISQLVVSIISSIFIIVYALKENVFVLGR KEAVLLTSIPLIGLYEVFVDPPYLDFLLLLLVILLFKTFKVIEKGDVKLVESFLPSKLKFISYILELMS
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52676; Mature: 52676
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIKNTLKTLSVITTNVIIALIFFIITAKITNPEFFGKVAIIQLLEVITSMFFYFIPGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH IITREISYLYARKELNRKVIGKFLSFPFLTLLVFLILLIFPNYVKLVIPYLFLYLLNNVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYIMYGMDMFTEGAITGNLFLIIRWGISIIAVLSHNIYIFIEIWTLGGILSVSMNYAFLS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEHHCHHHHHHHHHHHHH RKVGLILPSFDFAFLFKHFKEGLPLYLYSSAYFLSSQGDRVTTAYLLGSYYLGLYQFSAL HHHHHEECCHHHHHHHHHHHCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHH VAGVPSMILGALNNVLLPTASFYKALGKDEKKMSSISFRLLSLITFLAVIISIPIAVLVV HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKFFPTYSSAVEVLILLLLAITLPFPIGSLTNFIIAAKKSLRPFLLLSLLNGSLVLLTSY HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH LLIPRIGIMGGAISQLVVSIISSIFIIVYALKENVFVLGRKEAVLLTSIPLIGLYEVFVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHCC PPYLDFLLLLLVILLFKTFKVIEKGDVKLVESFLPSKLKFISYILELMS CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNPIKNTLKTLSVITTNVIIALIFFIITAKITNPEFFGKVAIIQLLEVITSMFFYFIPGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH IITREISYLYARKELNRKVIGKFLSFPFLTLLVFLILLIFPNYVKLVIPYLFLYLLNNVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYIMYGMDMFTEGAITGNLFLIIRWGISIIAVLSHNIYIFIEIWTLGGILSVSMNYAFLS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEHHCHHHHHHHHHHHHH RKVGLILPSFDFAFLFKHFKEGLPLYLYSSAYFLSSQGDRVTTAYLLGSYYLGLYQFSAL HHHHHEECCHHHHHHHHHHHCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHH VAGVPSMILGALNNVLLPTASFYKALGKDEKKMSSISFRLLSLITFLAVIISIPIAVLVV HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKFFPTYSSAVEVLILLLLAITLPFPIGSLTNFIIAAKKSLRPFLLLSLLNGSLVLLTSY HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH LLIPRIGIMGGAISQLVVSIISSIFIIVYALKENVFVLGRKEAVLLTSIPLIGLYEVFVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHCC PPYLDFLLLLLVILLFKTFKVIEKGDVKLVESFLPSKLKFISYILELMS CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA