Definition Sulfolobus islandicus M.14.25 chromosome, complete genome.
Accession NC_012588
Length 2,608,832

Click here to switch to the map view.

The map label for this gene is 227827233

Identifier: 227827233

GI number: 227827233

Start: 880656

End: 880976

Strand: Direct

Name: 227827233

Synonym: M1425_2824

Alternate gene names: NA

Gene position: 880656-880976 (Clockwise)

Preceding gene: 227827231

Following gene: 227827236

Centisome position: 33.76

GC content: 37.38

Gene sequence:

>321_bases
ATGACTAGGTCAGCGTCAGTGCTTAAGATTTTATCTAATTCCTCCTCAGTTATGGGAAAATCAGCATCTAATAACAAAAC
TCTCTGGAAATTGCTTTCATTAATTCCTCTCTTTAACGCTCCCCCTTTACCAAGTCTGCTCTCACTTATTAGGAGCTTTA
CGGGAAATTTCTTAACAACCTCTGGCGTATTATCATGTCCATCAAATACTACCACTATTTCAGCATTAGGTAGTGTTGAC
GATATTTTCTCCAACGTCCTACCAATTCTTCTTTCCTCATTAAATGCCGGTATGATAATTGAAATCAATCTAACCAGCTA
A

Upstream 100 bases:

>100_bases
AAATTTTGCTAGCGACGGAAAGAGTATCTTCGTAATTATTATAAATGCCTTATGTAGGAACTTCCTCTTTAATGGCATCC
CCACAATTTTCCTCTTAGGT

Downstream 100 bases:

>100_bases
TTATAAGTTAGAAATAAAAGGATTTCGGGCAAAGATCTATAATACTTATATAAGGTATTTCATAAGTAAAATAGACGAAA
ACAAATTTCATATATTTATC

Product: hypothetical protein, glimmer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTRSASVLKILSNSSSVMGKSASNNKTLWKLLSLIPLFNAPPLPSLLSLIRSFTGNFLTTSGVLSCPSNTTTISALGSVD
DIFSNVLPILLSSLNAGMIIEINLTS

Sequences:

>Translated_106_residues
MTRSASVLKILSNSSSVMGKSASNNKTLWKLLSLIPLFNAPPLPSLLSLIRSFTGNFLTTSGVLSCPSNTTTISALGSVD
DIFSNVLPILLSSLNAGMIIEINLTS
>Mature_105_residues
TRSASVLKILSNSSSVMGKSASNNKTLWKLLSLIPLFNAPPLPSLLSLIRSFTGNFLTTSGVLSCPSNTTTISALGSVDD
IFSNVLPILLSSLNAGMIIEINLTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11127; Mature: 10996

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSASVLKILSNSSSVMGKSASNNKTLWKLLSLIPLFNAPPLPSLLSLIRSFTGNFLTT
CCCCHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECC
SGVLSCPSNTTTISALGSVDDIFSNVLPILLSSLNAGMIIEINLTS
CCEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure 
TRSASVLKILSNSSSVMGKSASNNKTLWKLLSLIPLFNAPPLPSLLSLIRSFTGNFLTT
CCCHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECC
SGVLSCPSNTTTISALGSVDDIFSNVLPILLSSLNAGMIIEINLTS
CCEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA