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The map label for this gene is 227827178

Identifier: 227827178

GI number: 227827178

Start: 813329

End: 814120

Strand: Direct

Name: 227827178

Synonym: M1425_0859

Alternate gene names: NA

Gene position: 813329-814120 (Clockwise)

Preceding gene: 227827177

Following gene: 227827179

Centisome position: 31.18

GC content: 36.87

Gene sequence:

>792_bases
ATGAAAGGTATTGGTATTTTCGGTATTCACCATTGGGGTTTTTCGATTAGAGTTCCTAGAACTTCCGCAGGTGGGAGTTC
TTATATTGTTCCTCCCATAACGACTATTTTGGGTGCATTAAGTAGAGGTTACTGTACTGATTACGCTGTTAAGAACAACG
TTTCCTGTACTAAGGAGTTCATAGATAAATTCTCATCTGATCTATTCTGGGTTACTTACGGTACCGAGGAACATATGCTA
ATGCCCTATTCAGATCTCTTGAGGGAGGAGAGAGTACCATATAGACAGTCAAAGAATAGAAGTTTAGATCACGTAAGTGA
TTGGTTTGGAGTTTCAGCTTTTGGAAAAGTTTACTGTGAAAACGTAAATTTTAGCATATTACTGCTACTGAACAAGGAAA
ATTCCGAATTCTGGAGTAAATTGGGCTGGCAAATAATATCATTAGGCACAAAGGAGTCATTAGTTACAATAACTGATGTA
AAGGTAGTTGACGTAGAGGAAAGTAGTGATGAGGATATTTATACAATATATTATATACCGGCAGAATGTTTAACAAATAC
AGAAGAGTTTGAAGTAGTGAATATGCCCGTAAAGAACGTGTATGAGCTTTCCAGTAAGCCGAGTATTGGAGTTTTCTCAA
ATTTCCTAGTCCCAAGGAAGACCCCATTTATAGGAGGAAAGGTAAAGGTTAAGAAGAGTGACGTGAGAGGAAACATATGC
AAAGTTTATAAAGTAGCTGATAAATACGTGATAACCTTTAAGGAGGGATTAGGGAAATGGTATTCAAAATAA

Upstream 100 bases:

>100_bases
CGCTAAAATGTTGAATATTAGACAGCCTGCAGTAAAGTACTATCTAAAGGAGGAGAAAGGTAACGTCAATACGCCAATAG
ATGCGTTTACGGTAATGTAA

Downstream 100 bases:

>100_bases
ATCTTCCACCTGAGGGATTATTTGCTAGAAGTCTAGTAGTAAGTGAACTATTAGGTTTAAATAACGTTGGGATTAATATA
AATGACGATATAGCAAACAT

Product: CRISPR-associated protein Cas5 family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKGIGIFGIHHWGFSIRVPRTSAGGSSYIVPPITTILGALSRGYCTDYAVKNNVSCTKEFIDKFSSDLFWVTYGTEEHML
MPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCENVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDV
KVVDVEESSDEDIYTIYYIPAECLTNTEEFEVVNMPVKNVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSDVRGNIC
KVYKVADKYVITFKEGLGKWYSK

Sequences:

>Translated_263_residues
MKGIGIFGIHHWGFSIRVPRTSAGGSSYIVPPITTILGALSRGYCTDYAVKNNVSCTKEFIDKFSSDLFWVTYGTEEHML
MPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCENVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDV
KVVDVEESSDEDIYTIYYIPAECLTNTEEFEVVNMPVKNVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSDVRGNIC
KVYKVADKYVITFKEGLGKWYSK
>Mature_263_residues
MKGIGIFGIHHWGFSIRVPRTSAGGSSYIVPPITTILGALSRGYCTDYAVKNNVSCTKEFIDKFSSDLFWVTYGTEEHML
MPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCENVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDV
KVVDVEESSDEDIYTIYYIPAECLTNTEEFEVVNMPVKNVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSDVRGNIC
KVYKVADKYVITFKEGLGKWYSK

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29880; Mature: 29880

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIGIFGIHHWGFSIRVPRTSAGGSSYIVPPITTILGALSRGYCTDYAVKNNVSCTKEF
CCCEEEEEEEECCEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCCEECCCCHHHHHH
IDKFSSDLFWVTYGTEEHMLMPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCE
HHHHCCCEEEEEECCCCCEECCHHHHHHHHCCCCHHCCCCCHHHHHHHHCHHHHHHEEEC
NVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDVKVVDVEESSDEDIYTIYYIP
CCCEEEEEEEECCCHHHHHHHCEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEC
AECLTNTEEFEVVNMPVKNVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSDVRGNIC
HHHHCCCCCEEEEECCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCEE
KVYKVADKYVITFKEGLGKWYSK
EEEEECCEEEEEEHHHHHHHHCC
>Mature Secondary Structure
MKGIGIFGIHHWGFSIRVPRTSAGGSSYIVPPITTILGALSRGYCTDYAVKNNVSCTKEF
CCCEEEEEEEECCEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCCEECCCCHHHHHH
IDKFSSDLFWVTYGTEEHMLMPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCE
HHHHCCCEEEEEECCCCCEECCHHHHHHHHCCCCHHCCCCCHHHHHHHHCHHHHHHEEEC
NVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDVKVVDVEESSDEDIYTIYYIP
CCCEEEEEEEECCCHHHHHHHCEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEC
AECLTNTEEFEVVNMPVKNVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSDVRGNIC
HHHHCCCCCEEEEECCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCEE
KVYKVADKYVITFKEGLGKWYSK
EEEEECCEEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA