Definition Sulfolobus islandicus M.14.25 chromosome, complete genome.
Accession NC_012588
Length 2,608,832

Click here to switch to the map view.

The map label for this gene is 227827175

Identifier: 227827175

GI number: 227827175

Start: 810330

End: 811430

Strand: Direct

Name: 227827175

Synonym: M1425_0856

Alternate gene names: NA

Gene position: 810330-811430 (Clockwise)

Preceding gene: 227827174

Following gene: 227827176

Centisome position: 31.06

GC content: 47.14

Gene sequence:

>1101_bases
GTGAACCCCGAGAAAGAGCTGGACATTGCGAGGAGCGAGTTCATTAAGTCCTTCAACTACCTGATTGGAACACTGAGGAT
GAACGGATTGAGCAGAAAGGTCGCAGTAGGCTTAGCACTCATGACCTTGATAGGAGGAAGGGCCAGCATTAGAAACGCAT
CCATCACGTTCAAGCTAAACTACGCCAACTTGTTAAAAACACTGGAGAACCTAGAGAACACATGGAGTGACTACCTCGAG
GCGTTAAGCAAAGTGATAGTTGGACCGGTAGTAGTGATAATTGACGACACCTTCGACCACAAACTCTATTCCAGAGTAGA
GGGCATAGCAAGCAAGTACGGGAACTACTTAGCGTGGTGCTCCACGCACAAGAGATTCGAGCCCGGCATACAAGTCCTCA
CAATAGCCTTATACGACTTAGCCATGGGAAAGAGCTATTTGATAGGAGCTTTCCCATACGCCACGAGAAAGATGTGGGAA
AGCGGGATGGTAAGTGAGTTCAAGACCAAGATCGAGATGGCTGCGGAAATTATCGAGGTTCTCAAAGAGCGATTCCATGT
GGCGAGGGTAGTGTTTGACTCCTGGTATTGGTCGGAGAAGCTGGTGAAGGGTAGTGTAGTTTCTGAGTTGAAGTCTAATA
GGAGGCTTCTAAGGGTTAGGCCTTTGGAGGGAGAGAAGACGTTGGGGGTGGAGGGGCACCCCCATGTCGGAGATCTCCCT
CCAGGGTCTTACTTAGCTGAGTTGACCCTAGGAGACCAAGTTATTACTATAAAGTTGTTAATACTGGTATATAAAGATAA
CAGGCTCAACTTGTACTCCACTGACCTTAACTTGAGCGATGAGGAGATAGAGGTAACTTGGAAGATTAGGTGGGAGATAG
AGAAGTTACACAAGGATATTAAGGCTCTGGGTATGCAAGATTCCTCTTTCCTCAAGAGGAAGAGGCTTCAAGGTTATCTG
CTCCTCTTCGTGATGGCGGTTAACACGGTCAGAGATTTGATCAGCTCCCTTAACTTGAAGAGCGTGGAGGAACTTCTCCG
GTTCGTTGAAATACGTTTAGGAGGTGCTCTGGGTTTGATGAAAATCTTTAAGCTGCGTTAA

Upstream 100 bases:

>100_bases
TTTAAGTAACACTAGCAGTTGTTCTACTTTTCCTCGGTAATACAAAGTTCACGGTACTATCGATAAAGTTTTTAGATTTA
CGTTTAGTTGATTAAAAACT

Downstream 100 bases:

>100_bases
AGTAGAACAACTGCTAAGAGTATTTAAAATATAGGGGGACTATTCACCCCGCTGACGAGGCTTTCCGCCCCCTTAACCAA
TTTTTGTAAATAACGTATAG

Product: transposase, ISC1217

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLNYANLLKTLENLENTWSDYLE
ALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWCSTHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWE
SGMVSEFKTKIEMAAEIIEVLKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP
PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDIKALGMQDSSFLKRKRLQGYL
LLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLMKIFKLR

Sequences:

>Translated_366_residues
MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLNYANLLKTLENLENTWSDYLE
ALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWCSTHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWE
SGMVSEFKTKIEMAAEIIEVLKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP
PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDIKALGMQDSSFLKRKRLQGYL
LLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLMKIFKLR
>Mature_366_residues
MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLNYANLLKTLENLENTWSDYLE
ALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWCSTHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWE
SGMVSEFKTKIEMAAEIIEVLKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP
PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDIKALGMQDSSFLKRKRLQGYL
LLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLMKIFKLR

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41755; Mature: 41755

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCEEEEEEC
YANLLKTLENLENTWSDYLEALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEE
STHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWESGMVSEFKTKIEMAAEIIEV
CCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDI
CCCCEEEEECCCCCEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEEHHHHHHHH
KALGMQDSSFLKRKRLQGYLLLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLM
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
KIFKLR
HHHHCC
>Mature Secondary Structure
MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCEEEEEEC
YANLLKTLENLENTWSDYLEALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEE
STHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWESGMVSEFKTKIEMAAEIIEV
CCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDI
CCCCEEEEECCCCCEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEEHHHHHHHH
KALGMQDSSFLKRKRLQGYLLLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLM
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
KIFKLR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA