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The map label for this gene is ywrC [H]

Identifier: 227826741

GI number: 227826741

Start: 296341

End: 296805

Strand: Direct

Name: ywrC [H]

Synonym: M1425_0342

Alternate gene names: 227826741

Gene position: 296341-296805 (Clockwise)

Preceding gene: 227826740

Following gene: 227826750

Centisome position: 11.36

GC content: 33.98

Gene sequence:

>465_bases
ATGGGAGTTAATATAATAAGACTTGACGATACTGATGAAAAAATACTTGAGATCTTACGCTATAATGCTAAAAAGAGTTT
AAAAGAGTTATCGGACGAACTGGGAATACCTATAAGTACCGTGAGGTATAGGATAAAGAGACTGGAAGACGCTCAAATAA
TAAGAGGATATGTAGCCATAATAGACAGAGTGAACCTAGGTTTAAATGTTTCATTAGTCATGGAAATAGAGACAGTGCCT
TATTCTATAAAAAAGGTAGCTCAAGAACTAGGTGAAATACCAGAAGTGGTGAGAATATATGGTTTAGATAATGGGCCTAG
ATTACACGTACATATGATCTTTAAAGATGATGCAAGCGCACATCAATTTATAGCCAATAAATTGTACAATATTAAGGGAA
TTAAGACTGTTTCCATTTCAAGAATAATTGAGAGATATAAGATAGACCCCTCGGTATTGCTATGA

Upstream 100 bases:

>100_bases
TTATAAGAAGATAAGAGTTTAATTTATGCAATGAATCAATGGATAATCTTGTAATTTTTACAATAATCCTTATATGTTTG
ATAATGTATAATATATATTG

Downstream 100 bases:

>100_bases
GAAAATCGGAGTAGCAAGAGGAAAAAGATATCCCTTTCTTTTCTTCATTATTATTATTATTTGTCACTTATCTTTACATT
TAACGACTTTATTGGCATTA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGVNIIRLDDTDEKILEILRYNAKKSLKELSDELGIPISTVRYRIKRLEDAQIIRGYVAIIDRVNLGLNVSLVMEIETVP
YSIKKVAQELGEIPEVVRIYGLDNGPRLHVHMIFKDDASAHQFIANKLYNIKGIKTVSISRIIERYKIDPSVLL

Sequences:

>Translated_154_residues
MGVNIIRLDDTDEKILEILRYNAKKSLKELSDELGIPISTVRYRIKRLEDAQIIRGYVAIIDRVNLGLNVSLVMEIETVP
YSIKKVAQELGEIPEVVRIYGLDNGPRLHVHMIFKDDASAHQFIANKLYNIKGIKTVSISRIIERYKIDPSVLL
>Mature_153_residues
GVNIIRLDDTDEKILEILRYNAKKSLKELSDELGIPISTVRYRIKRLEDAQIIRGYVAIIDRVNLGLNVSLVMEIETVPY
SIKKVAQELGEIPEVVRIYGLDNGPRLHVHMIFKDDASAHQFIANKLYNIKGIKTVSISRIIERYKIDPSVLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR013199
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08280 HTH_Mga [H]

EC number: NA

Molecular weight: Translated: 17600; Mature: 17469

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVNIIRLDDTDEKILEILRYNAKKSLKELSDELGIPISTVRYRIKRLEDAQIIRGYVAI
CCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
IDRVNLGLNVSLVMEIETVPYSIKKVAQELGEIPEVVRIYGLDNGPRLHVHMIFKDDASA
HHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHEEEECCCCCEEEEEEEEECCCHH
HQFIANKLYNIKGIKTVSISRIIERYKIDPSVLL
HHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GVNIIRLDDTDEKILEILRYNAKKSLKELSDELGIPISTVRYRIKRLEDAQIIRGYVAI
CCEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
IDRVNLGLNVSLVMEIETVPYSIKKVAQELGEIPEVVRIYGLDNGPRLHVHMIFKDDASA
HHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHEEEECCCCCEEEEEEEEECCCHH
HQFIANKLYNIKGIKTVSISRIIERYKIDPSVLL
HHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]