| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826681
Identifier: 227826681
GI number: 227826681
Start: 237675
End: 238631
Strand: Direct
Name: 227826681
Synonym: M1425_0273
Alternate gene names: NA
Gene position: 237675-238631 (Clockwise)
Preceding gene: 227826677
Following gene: 227826682
Centisome position: 9.11
GC content: 37.2
Gene sequence:
>957_bases GTGACAAGAATCTTAATAATAGCCAGTGGTGGTGGTCATACAGGCTTCGCCAGGGCTATTGCCCAATATTTACCCGAAAA AGTAGATTTCGTGATACCAACAAATGACCCTTACAGTAGACAAATGATATCACAATATGCAAATAAAATCTACGAGATAC CTAAAGGAAGAGAACCAGACGAAAGTAGTCTAGTATTATTTAAGAGATTATTCTCTATAATAGTAAAGAGCGCCAATATT AAGAAATACGATTTAATCATAGCCACCGGGAGCAATCACTCCATATTTCCTTCCTTTTTTCAATTCTTAAAAGGTGGGAA GGTTTACGGTATCGAAAGTCAAGATAGACTTATCACCAAGGGAAAGGCGATAGGCATAATATCAAATTACGCAAAGGGTG TATTTCTTCATTGGCAAGAGCAAAGGAAACTTTATGAAAAGAAGGGTATTGTCGTGGGACCCATTGTTGAAAAGCCTAAG TATGAGAGTAAGGATGAAGGCTACATATTAGTTACAACTGGTAGCATGGGTTTTAAGAGGTTATTTGACGCAATAGTGAA ATCCGTTATAGGGAAGAGGATTGTCATACAGACGGGGAAAATAGATCCCACAATCTATCGTAATCAAAATGTTACTACGT TTAGTTTTGATCCAGATTTAGAAAAGTGGATTGCTAATGCATCTTTGGTAATAACGCATCAAGGTAAAACTGCCATGGAG GCAGTAGTAATGTATAGGAAGCCGGTAATAATGGTTTACAACAACGATTGGAAGAGTGCAACTACGTTAAGCGATGCCAA GAAGTATGCTGAGATATTGGGAGCTACGTTTTTAAGTGATCCAATAACGTGGAGCGATTATAACGTTTTATTAGAAGCTA TAGAAAACGCTAATGAGCCTAACGTTTTTGATACAGGTACTCCAAATCTGGTTAAACATGTATTAAGTGAACTATAA
Upstream 100 bases:
>100_bases TGGCTAAAATTACCGCACCCTTTAGCCACACTGGCTTATAACTTTCCATAAATATCGCTATGTCATTTAACTTAAATCTT TAGCTGTTACAAAGAGTATT
Downstream 100 bases:
>100_bases TGGTTCGTAAAATACTCGACACATTGCTGGAAATATTTGAAAACAATAAAAGCATATTGAAGGAAAAAGGTTGGATAGTT TCGTCCGAAACTTCTTATGA
Product: oligosaccharide biosynthesis protein Alg14 like protein
Products: NA
Alternate protein names: Glycosyltransferase Family; Oligosaccharide Biosynthesis Like Protein Protein; Oligosaccharide Biosynthesis Like Protein; Glycosyltransferase
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTRILIIASGGGHTGFARAIAQYLPEKVDFVIPTNDPYSRQMISQYANKIYEIPKGREPDESSLVLFKRLFSIIVKSANI KKYDLIIATGSNHSIFPSFFQFLKGGKVYGIESQDRLITKGKAIGIISNYAKGVFLHWQEQRKLYEKKGIVVGPIVEKPK YESKDEGYILVTTGSMGFKRLFDAIVKSVIGKRIVIQTGKIDPTIYRNQNVTTFSFDPDLEKWIANASLVITHQGKTAME AVVMYRKPVIMVYNNDWKSATTLSDAKKYAEILGATFLSDPITWSDYNVLLEAIENANEPNVFDTGTPNLVKHVLSEL
Sequences:
>Translated_318_residues MTRILIIASGGGHTGFARAIAQYLPEKVDFVIPTNDPYSRQMISQYANKIYEIPKGREPDESSLVLFKRLFSIIVKSANI KKYDLIIATGSNHSIFPSFFQFLKGGKVYGIESQDRLITKGKAIGIISNYAKGVFLHWQEQRKLYEKKGIVVGPIVEKPK YESKDEGYILVTTGSMGFKRLFDAIVKSVIGKRIVIQTGKIDPTIYRNQNVTTFSFDPDLEKWIANASLVITHQGKTAME AVVMYRKPVIMVYNNDWKSATTLSDAKKYAEILGATFLSDPITWSDYNVLLEAIENANEPNVFDTGTPNLVKHVLSEL >Mature_317_residues TRILIIASGGGHTGFARAIAQYLPEKVDFVIPTNDPYSRQMISQYANKIYEIPKGREPDESSLVLFKRLFSIIVKSANIK KYDLIIATGSNHSIFPSFFQFLKGGKVYGIESQDRLITKGKAIGIISNYAKGVFLHWQEQRKLYEKKGIVVGPIVEKPKY ESKDEGYILVTTGSMGFKRLFDAIVKSVIGKRIVIQTGKIDPTIYRNQNVTTFSFDPDLEKWIANASLVITHQGKTAMEA VVMYRKPVIMVYNNDWKSATTLSDAKKYAEILGATFLSDPITWSDYNVLLEAIENANEPNVFDTGTPNLVKHVLSEL
Specific function: Unknown
COG id: COG0707
COG function: function code M; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35731; Mature: 35600
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILIIASGGGHTGFARAIAQYLPEKVDFVIPTNDPYSRQMISQYANKIYEIPKGREPD CEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC ESSLVLFKRLFSIIVKSANIKKYDLIIATGSNHSIFPSFFQFLKGGKVYGIESQDRLITK HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCEEEC GKAIGIISNYAKGVFLHWQEQRKLYEKKGIVVGPIVEKPKYESKDEGYILVTTGSMGFKR CCEEEEHHHCCCCEEEEEHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEECCCCHHH LFDAIVKSVIGKRIVIQTGKIDPTIYRNQNVTTFSFDPDLEKWIANASLVITHQGKTAME HHHHHHHHHHCCEEEEEECCCCCEEEECCCEEEEECCCCHHHHHCCCEEEEEECCCHHHH AVVMYRKPVIMVYNNDWKSATTLSDAKKYAEILGATFLSDPITWSDYNVLLEAIENANEP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC NVFDTGTPNLVKHVLSEL CCCCCCCHHHHHHHHHHC >Mature Secondary Structure TRILIIASGGGHTGFARAIAQYLPEKVDFVIPTNDPYSRQMISQYANKIYEIPKGREPD EEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC ESSLVLFKRLFSIIVKSANIKKYDLIIATGSNHSIFPSFFQFLKGGKVYGIESQDRLITK HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCEEEC GKAIGIISNYAKGVFLHWQEQRKLYEKKGIVVGPIVEKPKYESKDEGYILVTTGSMGFKR CCEEEEHHHCCCCEEEEEHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEECCCCHHH LFDAIVKSVIGKRIVIQTGKIDPTIYRNQNVTTFSFDPDLEKWIANASLVITHQGKTAME HHHHHHHHHHCCEEEEEECCCCCEEEECCCEEEEECCCCHHHHHCCCEEEEEECCCHHHH AVVMYRKPVIMVYNNDWKSATTLSDAKKYAEILGATFLSDPITWSDYNVLLEAIENANEP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC NVFDTGTPNLVKHVLSEL CCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA