| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826626
Identifier: 227826626
GI number: 227826626
Start: 189624
End: 190154
Strand: Direct
Name: 227826626
Synonym: M1425_0217
Alternate gene names: NA
Gene position: 189624-190154 (Clockwise)
Preceding gene: 227826625
Following gene: 227826628
Centisome position: 7.27
GC content: 39.36
Gene sequence:
>531_bases ATGCCCAAGAGGGAAGAAAAGGATATTTTTGACTTAATGGACGAATGGATAAGGGAGATGGAAGAAGAATTCGAGAGAAT TGAGAGGGAATTTATGAGAGGTTTCAAAGGCAAAGGAGAGGAAGTTAAGCAATTTGGGCCATACGTTTACGGATTTAGAA TAACCGTAGGACCAGACGGCGTGCCGAAAATAGAGGAATTCGGTAACGTTAGGAAAATCAGAGGTAAGCCAATGATATCT GAAGAACGTGAGCCATTAGCTGACGTTATTGAGAAAGGTGATGAAATTAAGGTAGTAGCTGAAGTGCCTGGCGTTAACAA GGAGGATATTAAAGTTAAGGTGACAAATGGTGGAAAGAAATTAGTGATTACAGCCAAATCAGAGGAGAGGCAATACTATA AGGAGATTGATTTACCAGCAGAAGTAGACGAGAAGTCGGCTAAGGCTAATTTTAAGAATGGAGTTTTAGAGATAACTTTA AAGAAGAAAAGCCCTTCGTCAGATTCTGGTGTTGAAATAAAAGTTGAGTAA
Upstream 100 bases:
>100_bases TGAATTGGTACAACCAAAGGAATTATAAATATCGAGATACACTTGTCGAGGAATGTAAGAAACTTTAAAACTATATTTTC ATAATATATAATGATAATCT
Downstream 100 bases:
>100_bases TTATTTTTCCCTAACTTAATCAGAATTAGTTAAAATAAGTGGTTTTACTGTTGCCTTTTCTGATTTTATGAAACTTAATC CTAATTCGTCCTCAAGTACT
Product: heat shock protein Hsp20
Products: NA
Alternate protein names: Small Heat Shock Protein; Heat Shock Protein; Heat Shock Protein HSP; Molecular Chaperone; Hsp20/Alpha Crystallin Family Protein; Small Heat Shock Protein Related Protein; Hsp20-Type Molecular Chaperone; Chaperonin Hsp; Hsp20-Type Chaperone; HSP20 Family Protein; Small Heat Shock Protein Hsp
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPKREEKDIFDLMDEWIREMEEEFERIEREFMRGFKGKGEEVKQFGPYVYGFRITVGPDGVPKIEEFGNVRKIRGKPMIS EEREPLADVIEKGDEIKVVAEVPGVNKEDIKVKVTNGGKKLVITAKSEERQYYKEIDLPAEVDEKSAKANFKNGVLEITL KKKSPSSDSGVEIKVE
Sequences:
>Translated_176_residues MPKREEKDIFDLMDEWIREMEEEFERIEREFMRGFKGKGEEVKQFGPYVYGFRITVGPDGVPKIEEFGNVRKIRGKPMIS EEREPLADVIEKGDEIKVVAEVPGVNKEDIKVKVTNGGKKLVITAKSEERQYYKEIDLPAEVDEKSAKANFKNGVLEITL KKKSPSSDSGVEIKVE >Mature_175_residues PKREEKDIFDLMDEWIREMEEEFERIEREFMRGFKGKGEEVKQFGPYVYGFRITVGPDGVPKIEEFGNVRKIRGKPMISE EREPLADVIEKGDEIKVVAEVPGVNKEDIKVKVTNGGKKLVITAKSEERQYYKEIDLPAEVDEKSAKANFKNGVLEITLK KKSPSSDSGVEIKVE
Specific function: Unknown
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20169; Mature: 20038
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKREEKDIFDLMDEWIREMEEEFERIEREFMRGFKGKGEEVKQFGPYVYGFRITVGPDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEECCCC VPKIEEFGNVRKIRGKPMISEEREPLADVIEKGDEIKVVAEVPGVNKEDIKVKVTNGGKK CCCHHHHCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCEE LVITAKSEERQYYKEIDLPAEVDEKSAKANFKNGVLEITLKKKSPSSDSGVEIKVE EEEEECCHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEC >Mature Secondary Structure PKREEKDIFDLMDEWIREMEEEFERIEREFMRGFKGKGEEVKQFGPYVYGFRITVGPDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEECCCC VPKIEEFGNVRKIRGKPMISEEREPLADVIEKGDEIKVVAEVPGVNKEDIKVKVTNGGKK CCCHHHHCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCEE LVITAKSEERQYYKEIDLPAEVDEKSAKANFKNGVLEITLKKKSPSSDSGVEIKVE EEEEECCHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA