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The map label for this gene is ygcM [C]

Identifier: 227826615

GI number: 227826615

Start: 177968

End: 178384

Strand: Direct

Name: ygcM [C]

Synonym: M1425_0206

Alternate gene names: 227826615

Gene position: 177968-178384 (Clockwise)

Preceding gene: 227826614

Following gene: 227826618

Centisome position: 6.82

GC content: 34.77

Gene sequence:

>417_bases
ATGAAAGTTAGAGTTGGTATTGAAGGAATCACAATGGATTCAGCTCATTATACCTTATCGTCATATGCTGATAGCCAAAT
TCATGGTCATACGTACATTATTAATGTGGAAGTTGAGGGTGAAGTCAATGAGAAATCTGGATTTGTAGTAGACTTTAACT
TACTTAAAAAGATGGTTAGAGAGGTAATACAAGAGTGGGATCATAAACTTATCATACCTAAGGTTGACTTAGATAAGTCG
AGGTTTGAAGGTCCGTTCAGGGTGGATTACAAGGTAATAGATGCTCCATTTCCTACTGCTGAGTATATAGGTATTGAAGT
AGCAAAGGACATATATCTAAAACTGAATAAAAAGTACAGAATACTTTTAAAGATATATGAGGGAAAGGACTCTTACGCAA
TTATAGAGTATCCATAG

Upstream 100 bases:

>100_bases
GTAAAGACTGATTCTAACATTAGATCATTATGTGATGAGATAAGATATTTAAGCGAGTCCACATGGGAACATTTTGACAA
GAATATAAGGAGGTCTTTAA

Downstream 100 bases:

>100_bases
TCAATAGATCTTTTGTCAATTAGGAGGAGAAAATTAGAAAGCGTAAGCCTATGTTGTCAATCCACCTACATTCTTTAGAT
TCCTTTCTGTTCTTAAAACA

Product: hypothetical protein

Products: 2-Amino- 4-Oxo-6-(1',2'-Dioxoprolyl)-7,8-Dihydroxypteridine; Triphosphate. [C]

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKVRVGIEGITMDSAHYTLSSYADSQIHGHTYIINVEVEGEVNEKSGFVVDFNLLKKMVREVIQEWDHKLIIPKVDLDKS
RFEGPFRVDYKVIDAPFPTAEYIGIEVAKDIYLKLNKKYRILLKIYEGKDSYAIIEYP

Sequences:

>Translated_138_residues
MKVRVGIEGITMDSAHYTLSSYADSQIHGHTYIINVEVEGEVNEKSGFVVDFNLLKKMVREVIQEWDHKLIIPKVDLDKS
RFEGPFRVDYKVIDAPFPTAEYIGIEVAKDIYLKLNKKYRILLKIYEGKDSYAIIEYP
>Mature_138_residues
MKVRVGIEGITMDSAHYTLSSYADSQIHGHTYIINVEVEGEVNEKSGFVVDFNLLKKMVREVIQEWDHKLIIPKVDLDKS
RFEGPFRVDYKVIDAPFPTAEYIGIEVAKDIYLKLNKKYRILLKIYEGKDSYAIIEYP

Specific function: Tetrahydrobiopterin biosynthesis; second step. [C]

COG id: COG0720

COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.3.12 [C]

Molecular weight: Translated: 16003; Mature: 16003

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRVGIEGITMDSAHYTLSSYADSQIHGHTYIINVEVEGEVNEKSGFVVDFNLLKKMVR
CEEEEEECEEEECCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHH
EVIQEWDHKLIIPKVDLDKSRFEGPFRVDYKVIDAPFPTAEYIGIEVAKDIYLKLNKKYR
HHHHHCCCEEEEEEECCCHHHCCCCEEEEEEEEECCCCCHHEEEEEEEEEEEEEECCCEE
ILLKIYEGKDSYAIIEYP
EEEEEEECCCCEEEEECC
>Mature Secondary Structure
MKVRVGIEGITMDSAHYTLSSYADSQIHGHTYIINVEVEGEVNEKSGFVVDFNLLKKMVR
CEEEEEECEEEECCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHH
EVIQEWDHKLIIPKVDLDKSRFEGPFRVDYKVIDAPFPTAEYIGIEVAKDIYLKLNKKYR
HHHHHCCCEEEEEEECCCHHHCCCCEEEEEEEEECCCCCHHEEEEEEEEEEEEEECCCEE
ILLKIYEGKDSYAIIEYP
EEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 17.7 {6-(L-erythro-1,2-dihydroxypropyl} 5 {6-(L-erythro-1,2-dihydroxypropyl} 0.0091 {6-(L-erythro-1,2-dihydroxypropyl} 0.008 {6-(L-erythro-1,2-dihydroxypropyl} [C]

Substrates: 2-Amino-4-Oxo-6-(Erythro-1',2',3'- Trihydroxyprolyl)-7,8-Dihydroxypteridine Triphosphate [C]

Specific reaction: 2-Amino-4-Oxo-6-(Erythro-1',2',3'- Trihydroxyprolyl)-7,8-Dihydroxypteridine Triphosphate = 2-Amino- 4-Oxo-6-(1',2'-Dioxoprolyl)-7,8-Dihydroxypteridine + Triphosphate. [C]

General reaction: Intramolecular redox reaction; P-O bond cleavage; Triphosphate elimination [C]

Inhibitor: (NH4)2SO4 [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA