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The map label for this gene is dtdA

Identifier: 227826463

GI number: 227826463

Start: 43414

End: 44127

Strand: Direct

Name: dtdA

Synonym: M1425_0052

Alternate gene names: 227826463

Gene position: 43414-44127 (Clockwise)

Preceding gene: 227826462

Following gene: 227826465

Centisome position: 1.66

GC content: 35.15

Gene sequence:

>714_bases
ATGGACATTAAGCTAGTTTACTCTACTTCAGATCCAGTGGGTTTGACGATAAAAAAACTTGGATATAGTTTCGAAGAGAT
TGATGAAGATGTAACAGATTTTCACTACAAGAATGGTGAGGCTATAGTAATTTTTTCTAGGCATGAAAGTAAGGCAAGCA
TTCCCTCACTAACAGTACATTATCCTGGTAATCCATCTGAAGAAGTTATGGGTGGAGAGCCTAAAAAACTCGGAATAGCT
TATCCTAGGTTACTTACTTCGATTTTAAGAGAAATTAAAAAAATAGATCTAGATATAGAGAAAACTATGGAGGCTACTCA
TCATGGCCCTACATATCAAAACGTTCCAGTAATATTCGTAGAGATTGGTAGTGACAAGACGTATTGGACTAACGAGAGAA
TAGTCAGAACTTTAGTTGATTCAACTCTAAAAGGTATTGATAAGGTTGACGAGACAGATTGTAGAGATTACATTTCAGGT
TTCGGTGGACCCCACTATTCTAAGCTTTTTACTAAGTTAGCTGACGAGAGTTGTATAGGCCATGTGATTTCTAAGCATTA
TGTTGATAAGTTGGATGACAAGGTTATAATTCAAGCTATAGCCAATTCTGTGAATAATATTAATAAAGTCGTTATCGATA
GCTTAAACTTAAAGCAGAGAGAACGAATTATAGCGGCTCTAAAAAGCTTTGATATTCATATTCAGCTTAGATAG

Upstream 100 bases:

>100_bases
GTAAAGAAGATCTACTCAAATGCAATACTAATAACTGGTTATAGGTTCGGCTTTGCATTAGCTCCGGTACTTGCTGAGAA
AGCCATACAGATGATCAAAT

Downstream 100 bases:

>100_bases
TATTTGTGGAGTTAGTAGTGGTGAACCTATACTAAGGACTTTGCAACTATCTATGTTATTTTCACATTTCAAGCTAGTCA
AGCTAGCATTAGGTATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDIKLVYSTSDPVGLTIKKLGYSFEEIDEDVTDFHYKNGEAIVIFSRHESKASIPSLTVHYPGNPSEEVMGGEPKKLGIA
YPRLLTSILREIKKIDLDIEKTMEATHHGPTYQNVPVIFVEIGSDKTYWTNERIVRTLVDSTLKGIDKVDETDCRDYISG
FGGPHYSKLFTKLADESCIGHVISKHYVDKLDDKVIIQAIANSVNNINKVVIDSLNLKQRERIIAALKSFDIHIQLR

Sequences:

>Translated_237_residues
MDIKLVYSTSDPVGLTIKKLGYSFEEIDEDVTDFHYKNGEAIVIFSRHESKASIPSLTVHYPGNPSEEVMGGEPKKLGIA
YPRLLTSILREIKKIDLDIEKTMEATHHGPTYQNVPVIFVEIGSDKTYWTNERIVRTLVDSTLKGIDKVDETDCRDYISG
FGGPHYSKLFTKLADESCIGHVISKHYVDKLDDKVIIQAIANSVNNINKVVIDSLNLKQRERIIAALKSFDIHIQLR
>Mature_237_residues
MDIKLVYSTSDPVGLTIKKLGYSFEEIDEDVTDFHYKNGEAIVIFSRHESKASIPSLTVHYPGNPSEEVMGGEPKKLGIA
YPRLLTSILREIKKIDLDIEKTMEATHHGPTYQNVPVIFVEIGSDKTYWTNERIVRTLVDSTLKGIDKVDETDCRDYISG
FGGPHYSKLFTKLADESCIGHVISKHYVDKLDDKVIIQAIANSVNNINKVVIDSLNLKQRERIIAALKSFDIHIQLR

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_SULIA (C3N0C0)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002842126.1
- ProteinModelPortal:   C3N0C0
- GeneID:   7813662
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_0052
- OMA:   CYEATHH
- ProtClustDB:   PRK03995
- HAMAP:   MF_00562
- InterPro:   IPR007508
- InterPro:   IPR018033
- PIRSF:   PIRSF016210

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 26762; Mature: 26762

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKLVYSTSDPVGLTIKKLGYSFEEIDEDVTDFHYKNGEAIVIFSRHESKASIPSLTVH
CCEEEEEECCCCCCEEHHHHCCCHHHHCCHHHHHEECCCCEEEEEECCCCCCCCCEEEEE
YPGNPSEEVMGGEPKKLGIAYPRLLTSILREIKKIDLDIEKTMEATHHGPTYQNVPVIFV
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEE
EIGSDKTYWTNERIVRTLVDSTLKGIDKVDETDCRDYISGFGGPHYSKLFTKLADESCIG
EECCCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HVISKHYVDKLDDKVIIQAIANSVNNINKVVIDSLNLKQRERIIAALKSFDIHIQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MDIKLVYSTSDPVGLTIKKLGYSFEEIDEDVTDFHYKNGEAIVIFSRHESKASIPSLTVH
CCEEEEEECCCCCCEEHHHHCCCHHHHCCHHHHHEECCCCEEEEEECCCCCCCCCEEEEE
YPGNPSEEVMGGEPKKLGIAYPRLLTSILREIKKIDLDIEKTMEATHHGPTYQNVPVIFV
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEE
EIGSDKTYWTNERIVRTLVDSTLKGIDKVDETDCRDYISGFGGPHYSKLFTKLADESCIG
EECCCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HVISKHYVDKLDDKVIIQAIANSVNNINKVVIDSLNLKQRERIIAALKSFDIHIQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA