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The map label for this gene is ybbK [C]

Identifier: 227826424

GI number: 227826424

Start: 9076

End: 9879

Strand: Direct

Name: ybbK [C]

Synonym: M1425_0013

Alternate gene names: 227826424

Gene position: 9076-9879 (Clockwise)

Preceding gene: 227826423

Following gene: 227826431

Centisome position: 0.35

GC content: 34.83

Gene sequence:

>804_bases
TTGGCAATTAATGTAGGAGACATAGTAGGCATAGTATTTCTAATCATTATAATAATCATCTTTATTGCCATGTCATTTAG
AGTAGTCAGAGAATGGGAGAGAGCCGTTGTGTTGAGATTAGGGAGATTTTTAAGAATAAAAGGCCCTGGAATCATATTCC
TTATACCCTTTGTTGATAGACCATTAATAGTAGATCTAAGAGTAAATACTGTTGAGGTTCCACCTCAAACTATCTTAACT
AGAGATAACGTTACTGTAAGTGTAGACGCTGTAGTGTACTATAAAGTGGTTGACCCACAAAAAGCAGTATTAAGTGTTTA
CAACTATAATGTAGCAGTACTAAATTTAGCTCAAACCTCATTAAGGGATATTGTTGGACAAATGGAATTAGATGAGCTAT
TAAGTAAAAGGGAAGAAATCAATAAGAGGATACAAGAAATATTAGATGTTACAACTGAAGGGTGGGGAATTAAAGTCACC
GCTGTAACTATAAGAGATATTAGATTATCTCAAGATTTGTTATCTGCTATGGCAAAGCAAGCTGAGGCAGAGAGATTAAG
AAGAGCGAAGGTAATACTAAGTGAAGGTGAGAGACAAGCTGCAAGTATTTTAGCTGACGCATCTACTTATTACAAGGATA
ATCCATCAGCATTACAGTTAAGGTTTTTGGAAACATTATCAGATATTTCACAAAGAGGAGGTTTAATAATTGTAGTTCCG
GCAGGAAATGAAATATACCCTACTCTAGGTACTAGTGCTGCATTATCAACTCTCTCAAAAAAGTTACAAACTGAAACCAA
ATAG

Upstream 100 bases:

>100_bases
GTATATTATACTTTACATCTTAGCTTTTGTAATAGGTATGGTTATTTCAGCAATATTAATAAGGTTCAAATTATAGTTAT
ATATTTGGAGGTAGTAGGAT

Downstream 100 bases:

>100_bases
TCAGCTGGACTAGGAGTCTTCATCCATCATTTACGTCTTTCTCATCATTAGTTCTGCCAGCTTATCGTTCATATCTAAAT
AGTTTTCTCTAGCTAAGTTA

Product: band 7 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAINVGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRIKGPGIIFLIPFVDRPLIVDLRVNTVEVPPQTILT
RDNVTVSVDAVVYYKVVDPQKAVLSVYNYNVAVLNLAQTSLRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVT
AVTIRDIRLSQDLLSAMAKQAEAERLRRAKVILSEGERQAASILADASTYYKDNPSALQLRFLETLSDISQRGGLIIVVP
AGNEIYPTLGTSAALSTLSKKLQTETK

Sequences:

>Translated_267_residues
MAINVGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRIKGPGIIFLIPFVDRPLIVDLRVNTVEVPPQTILT
RDNVTVSVDAVVYYKVVDPQKAVLSVYNYNVAVLNLAQTSLRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVT
AVTIRDIRLSQDLLSAMAKQAEAERLRRAKVILSEGERQAASILADASTYYKDNPSALQLRFLETLSDISQRGGLIIVVP
AGNEIYPTLGTSAALSTLSKKLQTETK
>Mature_266_residues
AINVGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRIKGPGIIFLIPFVDRPLIVDLRVNTVEVPPQTILTR
DNVTVSVDAVVYYKVVDPQKAVLSVYNYNVAVLNLAQTSLRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTA
VTIRDIRLSQDLLSAMAKQAEAERLRRAKVILSEGERQAASILADASTYYKDNPSALQLRFLETLSDISQRGGLIIVVPA
GNEIYPTLGTSAALSTLSKKLQTETK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=232, Percent_Identity=45.2586206896552, Blast_Score=183, Evalue=1e-46,
Organism=Homo sapiens, GI221316744, Length=242, Percent_Identity=45.0413223140496, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI21686995, Length=242, Percent_Identity=45.0413223140496, Blast_Score=180, Evalue=9e-46,
Organism=Homo sapiens, GI7657615, Length=238, Percent_Identity=34.8739495798319, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI7305503, Length=174, Percent_Identity=39.0804597701149, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI20149563, Length=158, Percent_Identity=31.6455696202532, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1786697, Length=204, Percent_Identity=36.2745098039216, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1790616, Length=198, Percent_Identity=26.2626262626263, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17569493, Length=236, Percent_Identity=47.4576271186441, Blast_Score=191, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI193209764, Length=236, Percent_Identity=47.4576271186441, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17569497, Length=235, Percent_Identity=41.2765957446808, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI25153583, Length=235, Percent_Identity=45.531914893617, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71987612, Length=235, Percent_Identity=45.531914893617, Blast_Score=182, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71987621, Length=235, Percent_Identity=45.531914893617, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI193210507, Length=255, Percent_Identity=43.5294117647059, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI32566490, Length=228, Percent_Identity=45.1754385964912, Blast_Score=175, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17570161, Length=255, Percent_Identity=43.5294117647059, Blast_Score=175, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17569499, Length=255, Percent_Identity=41.5686274509804, Blast_Score=171, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI71989948, Length=224, Percent_Identity=45.0892857142857, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17570459, Length=240, Percent_Identity=39.5833333333333, Blast_Score=157, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI71989955, Length=180, Percent_Identity=47.7777777777778, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI32564147, Length=177, Percent_Identity=38.4180790960452, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=50.4201680672269, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17542664, Length=188, Percent_Identity=28.1914893617021, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45556022, Length=250, Percent_Identity=46, Blast_Score=194, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24657857, Length=234, Percent_Identity=47.4358974358974, Blast_Score=187, Evalue=6e-48,
Organism=Drosophila melanogaster, GI281365664, Length=234, Percent_Identity=47.4358974358974, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI62484448, Length=234, Percent_Identity=47.4358974358974, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI62484274, Length=232, Percent_Identity=48.2758620689655, Blast_Score=185, Evalue=3e-47,
Organism=Drosophila melanogaster, GI18860517, Length=250, Percent_Identity=45.2, Blast_Score=183, Evalue=1e-46,
Organism=Drosophila melanogaster, GI28573263, Length=236, Percent_Identity=41.1016949152542, Blast_Score=174, Evalue=5e-44,
Organism=Drosophila melanogaster, GI281361631, Length=240, Percent_Identity=37.5, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI281361633, Length=240, Percent_Identity=37.5, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI21356845, Length=238, Percent_Identity=35.2941176470588, Blast_Score=158, Evalue=4e-39,
Organism=Drosophila melanogaster, GI45550506, Length=180, Percent_Identity=40, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281361635, Length=175, Percent_Identity=38.2857142857143, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24585145, Length=240, Percent_Identity=27.5, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24585147, Length=240, Percent_Identity=27.5, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 29746; Mature: 29615

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINVGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRIKGPGIIFLIPFVDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCC
PLIVDLRVNTVEVPPQTILTRDNVTVSVDAVVYYKVVDPQKAVLSVYNYNVAVLNLAQTS
CEEEEEEEEEEECCCHHEEECCCEEEEEEEEEEEEEECCHHHHHHHHCCCEEEEEHHHHH
LRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTAVTIRDIRLSQDLLSAMAKQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHH
AEAERLRRAKVILSEGERQAASILADASTYYKDNPSALQLRFLETLSDISQRGGLIIVVP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
AGNEIYPTLGTSAALSTLSKKLQTETK
CCCEECCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AINVGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRIKGPGIIFLIPFVDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCC
PLIVDLRVNTVEVPPQTILTRDNVTVSVDAVVYYKVVDPQKAVLSVYNYNVAVLNLAQTS
CEEEEEEEEEEECCCHHEEECCCEEEEEEEEEEEEEECCHHHHHHHHCCCEEEEEHHHHH
LRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTAVTIRDIRLSQDLLSAMAKQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHH
AEAERLRRAKVILSEGERQAASILADASTYYKDNPSALQLRFLETLSDISQRGGLIIVVP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
AGNEIYPTLGTSAALSTLSKKLQTETK
CCCEECCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]