| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
Click here to switch to the map view.
The map label for this gene is 227826416
Identifier: 227826416
GI number: 227826416
Start: 3277
End: 3576
Strand: Direct
Name: 227826416
Synonym: M1425_0005
Alternate gene names: NA
Gene position: 3277-3576 (Clockwise)
Preceding gene: 227826415
Following gene: 227826423
Centisome position: 0.13
GC content: 30.33
Gene sequence:
>300_bases ATGAGTGGAATTTCCTCGAAGGGACTAGAGGAACTTAAAAATAACGGTTGGTTAATATTAGAGGATGGGAAGAAGATTAA GAAGGAATTTAAGTTTAAGGATTTTAAGCAATCAATAGATTTCTTGAAAGATATACAACCATCAGCTGATGCTTTAGATC ATCATCCTGATGTTTGTATCTATTATAATAGAGTAATAGTGGAGTTAACAACCCATGATATGGGAGGATTAACAGATCTT GACTATAAATTGGCTATAAAAATTGATGAACTTTATAAAATGAAAACTAGTAATTTATAG
Upstream 100 bases:
>100_bases AATTCCTCTAGTTATAGCTTTAGTAAAGAAATTCTTAGCAGAAATTAAGTGATTCTTTATAACAAGCTATTTTTTTAACT CTCGTTTACTTATATTTTTT
Downstream 100 bases:
>100_bases TAAGGATTGACGTGTAAAATGACAATAGCGTTTTTGTACATTAATCCTTGCACTATTTATCAAAATTTTAAGAAGTTAGA AAGAACTCAATACGTTCTCT
Product: transcriptional coactivator/pterin dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSGISSKGLEELKNNGWLILEDGKKIKKEFKFKDFKQSIDFLKDIQPSADALDHHPDVCIYYNRVIVELTTHDMGGLTDL DYKLAIKIDELYKMKTSNL
Sequences:
>Translated_99_residues MSGISSKGLEELKNNGWLILEDGKKIKKEFKFKDFKQSIDFLKDIQPSADALDHHPDVCIYYNRVIVELTTHDMGGLTDL DYKLAIKIDELYKMKTSNL >Mature_98_residues SGISSKGLEELKNNGWLILEDGKKIKKEFKFKDFKQSIDFLKDIQPSADALDHHPDVCIYYNRVIVELTTHDMGGLTDLD YKLAIKIDELYKMKTSNL
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI4557831, Length=83, Percent_Identity=38.5542168674699, Blast_Score=66, Evalue=5e-12, Organism=Homo sapiens, GI134133240, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI115533705, Length=85, Percent_Identity=42.3529411764706, Blast_Score=75, Evalue=5e-15, Organism=Drosophila melanogaster, GI45549100, Length=81, Percent_Identity=37.037037037037, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_SULIA (C3MZU9)
Other databases:
- EMBL: CP001401 - RefSeq: YP_002842079.1 - GeneID: 7812065 - GenomeReviews: CP001401_GR - KEGG: sim:M1627_0005 - OMA: TVEIYTH - ProtClustDB: CLSK2484518 - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11408; Mature: 11277
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGISSKGLEELKNNGWLILEDGKKIKKEFKFKDFKQSIDFLKDIQPSADALDHHPDVCI CCCCCCCCHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCEEE YYNRVIVELTTHDMGGLTDLDYKLAIKIDELYKMKTSNL EEEEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCCC >Mature Secondary Structure SGISSKGLEELKNNGWLILEDGKKIKKEFKFKDFKQSIDFLKDIQPSADALDHHPDVCI CCCCCCCHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCEEE YYNRVIVELTTHDMGGLTDLDYKLAIKIDELYKMKTSNL EEEEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA