| Definition | Sinorhizobium fredii NGR234 chromosome, complete genome. |
|---|---|
| Accession | NC_012587 |
| Length | 3,925,702 |
Click here to switch to the map view.
The map label for this gene is cpaC1
Identifier: 227823971
GI number:
Start: 3673712
End: 3675259
Strand: Direct
Name: cpaC1
Synonym: NGR_c34670
Alternate gene names: NA
Gene position: NA
Preceding gene: 227823970
Following gene: 227823972
Centisome position: NA
GC content: NA
Gene sequence:
>1548_bases GTGAAGCGGAGCGGAAACACATTTCGGACCTGTCTCGCAGCCGGTCTTTCATTCTCGCTGACATTTTCCGGCCTGATGCT GCCGGCGGTTCCGACCGCGCAAGCCGCCGCCTCCTCGGTGGTCCGCATCGTCGAAAGCGGTCCGGGCGTGAAGCGAAAAG TCAATCTCGGTCTCAACAAGGCCGTGGTCGTCGATCTCCCGACCGATGCCCATGATATTCTCGTTGCCGATCCGGTGCTT GCCGATGCAGTCACGCGCACGTCGCGCCGCATCTACCTGTTCGGCAAGACCGTCGGCCAGACCAACATCTTCGTGTTCGG CCCGAATGGCGAGGAGATCGTCAGTCTCGAAGTTGCCGTCGAGCGCGATGTCGCCGGCCTTGAGGCCAACCTGCGTCGTT TCATTCCGGAGGCGGACATCAATGTCGAAATCATCTCCGACAACGTGGTTCTGACCGGCACCGTTCGCACGCCGCTCGAT TCGACCAAGGCGGTCGACCTCGCCCGGGCCTTCCTGCAGGGCGGCGAGGCGACGACCCGCAACATCACAGCCCAGGGCAC CAACGGCGATGCCGATATTTTCGCGGAAGAACGACAAACCTCGCAGATCGTCAATCTGCTGACCGTCGAGGGCGAGGATC AGGTGACCTTGAAGGTCACCGTCGCTGAGGTCAGTCGCCAGGTTCTGAAGCAACTTGGCTTCAACGGCCGCATAAGTGAC GGCGAAAGTGGATTGAGCTTCCGCAATCCGGCCAATCTCGGCGACGCAATCGGCGTCGGCGCCAATGCACTCATAAAAGG CTCGATCGGCCCGACTACGATTTCGAGCTACATCAATGCGATGGAGCAGGCGGGAGTCATGCGGACGCTGGCCGAACCGA GCCTGACGGCCATTTCGGGCCAAGAGGCGAAGTTCTACGTCGGCGGTGAATTCCGCCTCGCGGGGGTGCAGGAGATCACA ACGGAAGAGGATGAGGCTACCGGAGAGTCCGTCCCAGTAGTTGAGCGGGAAGTTGAGGATGCCGAATATGGTATTCGCCT GAACTTCAAGCCTGTCGTCCTTGGTGCCGGCCGCATCAGTCTGGCAATCGAGACAGAAGTTTCGGAGCCGACCTATGAGG GTTCGGTTGTAACGGGAAACAGTTTTAGAGATATTCCCGGTAACACCTTCCTCGGCATCCGTCGCCGCGAAGCCTCGACC AGCGTCGAACTTCCCTCCGGCGGCTCGATCGTCATCGCCGGCCTCGTGCAGGACAATATCCGCCAGGCGATGTCCGGCCT GCCCGGTGCTTCAAAGATCCCGATCCTCGGCACGCTGTTCCGCAGCAAGGATTTCCAGCGCAATGAATCGGAACTCGTGA TCATCGCGACGCCCTATCTGGTGCGGCCGGTCGCCCGCAGCGCGCTGTCGCGACCCGACGACAACTTCAATCCGGCCAAC GATCTCGAAAGCTTCTTCGTCGGCCGCGTCAATCGGATCTACGGGCGTCCCGAGGCAGCACCCCCCGTCGGCCGCTATCA CGGCAATGTCGGCTTCATCTACAAATAG
Upstream 100 bases:
>100_bases CCAGCCGAGCATTCAGGTCATCAAATCCGGTTCCATCGTCAAGAATGATGGCACCACCACGACAACGCAGAACCAGCAGT AAGATCGGACGGGGCGCAAC
Downstream 100 bases:
>100_bases GTCGGGTCATGCACAACCGAAACGCAGTTCACAAAAGACTTGAAAGGCCGGCCTCGATGTCGCTGACCCGCACCCCGGCC CGCATGGCCGCATTGGCCAT
Product: pilus assembly protein CpaC, contains signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>515_residues MKRSGNTFRTCLAAGLSFSLTFSGLMLPAVPTAQAAASSVVRIVESGPGVKRKVNLGLNKAVVVDLPTDAHDILVADPVL ADAVTRTSRRIYLFGKTVGQTNIFVFGPNGEEIVSLEVAVERDVAGLEANLRRFIPEADINVEIISDNVVLTGTVRTPLD STKAVDLARAFLQGGEATTRNITAQGTNGDADIFAEERQTSQIVNLLTVEGEDQVTLKVTVAEVSRQVLKQLGFNGRISD GESGLSFRNPANLGDAIGVGANALIKGSIGPTTISSYINAMEQAGVMRTLAEPSLTAISGQEAKFYVGGEFRLAGVQEIT TEEDEATGESVPVVEREVEDAEYGIRLNFKPVVLGAGRISLAIETEVSEPTYEGSVVTGNSFRDIPGNTFLGIRRREAST SVELPSGGSIVIAGLVQDNIRQAMSGLPGASKIPILGTLFRSKDFQRNESELVIIATPYLVRPVARSALSRPDDNFNPAN DLESFFVGRVNRIYGRPEAAPPVGRYHGNVGFIYK
Sequences:
NA
Specific function: NA
COG id: COG4964
COG function: function code U; Flp pilus assembly protein, secretin CpaC
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA