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The map label for this gene is ydbI [H]

Identifier: 227818208

GI number: 227818208

Start: 5178548

End: 5179492

Strand: Reverse

Name: ydbI [H]

Synonym: BAMEG_5735

Alternate gene names: 227818208

Gene position: 5179492-5178548 (Counterclockwise)

Preceding gene: 227818209

Following gene: 227818207

Centisome position: 99.03

GC content: 31.53

Gene sequence:

>945_bases
ATGTTGAATTTAATATTAATTACGTTTATTCTTACGTATTTAATGGATCGATTCCAAAAGTTTATTTCTCGCAAATTAGA
CCACTTTATGCCCATTAATCGAAAGCTCATTATAGCATTTCTATATGTCATGTTAATTGGTGGAATTGCTATTACGCTAT
TTAAATATTTACCAGTGTTAACAATACAAATTTCACAATTAATTTATCAATTTAACGTATTTTTAAGAAACCCACCAGAT
AGTGAATTAATTAAGTATGCAGTTAATGCTGTCAATCATATGGAACTTTCGAAGTATGTAGGACAAGGCGTTGACATTTT
GTATAAATCGATTACGAATGTTGGAAAATTTGGCCTTCAAGTGTTACTTTCTTTAATCTTAAGTTTATTTTTCTTATTGG
AGAAAGCTCGCATCGTTGCTTTTACTGCAAAATTTAAAGAAAGTCGACTTGCAATTTTCTATACTGAAATCGAGTACTTC
GGTAAGAAATTTGCACGTTCATTCGGAAAAGTAATCGAAGCCCAATTTTTAATTGCAGTTGTTAACTGCGTTTTATCCGT
TATTGCACTATGGATATTAGGATTCCCACAATTATTAGGTTTAGCATTAATGATCTTCTTACTTGGTTTAATTCCAGTAG
CTGGGGTTATCATTTCGTTATTCCCGCTTTGTATGATTGCTTACAATATCGGCGGTATTATGTACGTGGTTTATATTTTA
GTTATCGTAACAGTCATTCATGCGCTTGAAAGTTACGTGTTAAATCCGAAGTTTATGTCGCAAAAAACAAACTTACCTAT
TTTCTATACGTTTATGGTATTAATCTTCTCAGAACACTTCTTAGGTGTGTGGGGATTAATTATCGGTATTCCAATCTTTA
TTTTCTTATTAGATGTCTTAGATGTGACAAGTGATGAAATGGAGAAGGACGTTAGAACAAAATAA

Upstream 100 bases:

>100_bases
CTCGTCGATTATGCAAATAAAAAACCTGTTTCAAAGCAAAGGATTTCAGAGGTTACTCGTATTAGTAATACTTGCTCTCG
TGTTATATGGGCTGCAAAGT

Downstream 100 bases:

>100_bases
AGCGAAGAAAAGAAAAAGCATCGATTTTCGATGCTTTTTCTTTTATAACATGATGTTTCTTATGCCATACTGTAAGGAGA
AGATAGAATAGGGGTGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD
SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEIEYF
GKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIL
VIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVRTK

Sequences:

>Translated_314_residues
MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD
SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEIEYF
GKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIL
VIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVRTK
>Mature_314_residues
MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD
SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEIEYF
GKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIL
VIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVRTK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 35858; Mature: 35858

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEIEYFGKKFARSFGKVIEAQFLIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVL
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVTSDEMEKDVRTK
HCCHHHHHHHCCCC
>Mature Secondary Structure
MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEIEYFGKKFARSFGKVIEAQFLIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVL
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVTSDEMEKDVRTK
HCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]