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The map label for this gene is ywqB [H]

Identifier: 227818006

GI number: 227818006

Start: 4976609

End: 4978228

Strand: Direct

Name: ywqB [H]

Synonym: BAMEG_5532

Alternate gene names: 227818006

Gene position: 4976609-4978228 (Clockwise)

Preceding gene: 227818002

Following gene: 227818007

Centisome position: 95.15

GC content: 38.52

Gene sequence:

>1620_bases
ATGCTGCAACACTCAATTACGAAAGATGAAATTATGATGATTGCGAATGAGTTCGTTCAAGGACTAGATCCACAGCAAAC
AGCTGATCAGGAACATGTCGCTACAGCTCGGCACCTATATCGTAGTGGTGTTGTCTACAACGTTGACTTTGATGGCTATA
CGCTATCAGGAACTGTAGATGCTGAAGGCAGCGTATATAGCGTCCATATCCCGATTCGCAACGTCGCTGAAAGCTATTGC
GATTGCTTCGCACCAACGCAATGCGAGCATATGCTCGCTGTGTTACTATCGGCAGCATCTAGTTTCGGGCAAGTAGGAGA
TGTATTAACTTTATTTAAAAATAATACGAAACCTTCCCTTCCTCCTATTCGAACTGCAAGACAAGTATTGCAATCATCAG
CTTTTGAAGAAACGGATTATAAAAGTTGGCAATCGTATTTTGATAACGAATATGAATCATTTAAAAAAGAACAAGCTCGG
CTTACTTATAAACAAATGTATTTTCTTATGAGTATTTTTACGGACTTCTATACAAAACTCGAGCGGAAAGCTCCACGTAT
CGTTGTGATACATGAGTTGTTCAGGCTACATGCAGCACTTTATTGCTTTCAAAAATTATTAGAAGAAATTCAGGAATTTG
AAACAAATAAAACGTATTCTTATCACCAGCCTGTTAACGTCGTTCGTATCTTTGTAGATAAAGTGGAATCCATCGTTCGG
GACTTACAATCAGAAGCGACTTCTTCAGAGTCTGAAGCAATTTTGCAAGAAACAGCTCGTCTCGTTCATGAAGTATTCTT
CTCGACCGACGCCTATACGCAAGAGAGATTTTTTATTTATCGTCACATATGGAGTGAACTTTTACACAATAAAGAGCAAA
TTCGTGAAGAAGAAAAACGAATCGATACGAAAATGAATCCACTTTCCAAAGCGTTAGCATCTTCTCATCTACTCTTTTTA
AATGACGAAGATCTATTAGCGATGGACTTATTAAAAAAACATCCTGCTTCTGTTGTAAGTCTGTACTTTTACTGGTTAGA
AGAGCTATTAAATGCAATGAAGTGGGATCGCGCGAAAAGCTGGCTTTCCTTTACGTATAAACAAGTAAAAACAACGATAC
AGGAGCAAGAAAATACGATTTTCATAAAAGATATCGTTCGCTTATTTGTTATCATGTATGAAACGTATGCAACCCATACA
AATGAACAAGCAGGACTCGAAATGATTTTGCAGGAGCTATTACCATATAGTTTCGCAAACTATGAACAATACGTGCTCGC
GAAAAAGCAGTATCGCACATGGACGGAACTTCAGCTCTTACACGGTTTTGAAGCGATTGAACTTTTAAAAGAGCCGCTGA
AAGATATTGAAAAGGAAGCACCAGAAGCAGCACTTCCTCTTTATCACCTGGCTGCTACCGAAGCCATTGAAGAGCGAAAT
CGTAAAGCATATAGACGTGCAGTTCGTTACTTAAAGAAATTACGTACATTATATAAACGATTAAAGCGTACCGATGAATG
GGATGCTTTCATTATTCACATCGCAAACTTACATTCACGTCTGCGTGCACTACAAGAGGAATTACGGAAAGGAAAATTAA
TCGATGATCAATCAAACTGA

Upstream 100 bases:

>100_bases
CATGATTTTCAAGTAATGTAATCTAAATTTCATTTTTTCTGTTTTGAGCATTTTTTGTTTATAATGGTAAAGGAAAGAAA
TATGTGTACGGAGGAATATT

Downstream 100 bases:

>100_bases
AGTAACAATTAGGCTCCAGCACGTTAGTCACGGTTGGTTCCTTTGGGGAGAAGATGATAGCGGTACTCCATTATCCGTAA
CAAGTTGGAAACGAAATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MLQHSITKDEIMMIANEFVQGLDPQQTADQEHVATARHLYRSGVVYNVDFDGYTLSGTVDAEGSVYSVHIPIRNVAESYC
DCFAPTQCEHMLAVLLSAASSFGQVGDVLTLFKNNTKPSLPPIRTARQVLQSSAFEETDYKSWQSYFDNEYESFKKEQAR
LTYKQMYFLMSIFTDFYTKLERKAPRIVVIHELFRLHAALYCFQKLLEEIQEFETNKTYSYHQPVNVVRIFVDKVESIVR
DLQSEATSSESEAILQETARLVHEVFFSTDAYTQERFFIYRHIWSELLHNKEQIREEEKRIDTKMNPLSKALASSHLLFL
NDEDLLAMDLLKKHPASVVSLYFYWLEELLNAMKWDRAKSWLSFTYKQVKTTIQEQENTIFIKDIVRLFVIMYETYATHT
NEQAGLEMILQELLPYSFANYEQYVLAKKQYRTWTELQLLHGFEAIELLKEPLKDIEKEAPEAALPLYHLAATEAIEERN
RKAYRRAVRYLKKLRTLYKRLKRTDEWDAFIIHIANLHSRLRALQEELRKGKLIDDQSN

Sequences:

>Translated_539_residues
MLQHSITKDEIMMIANEFVQGLDPQQTADQEHVATARHLYRSGVVYNVDFDGYTLSGTVDAEGSVYSVHIPIRNVAESYC
DCFAPTQCEHMLAVLLSAASSFGQVGDVLTLFKNNTKPSLPPIRTARQVLQSSAFEETDYKSWQSYFDNEYESFKKEQAR
LTYKQMYFLMSIFTDFYTKLERKAPRIVVIHELFRLHAALYCFQKLLEEIQEFETNKTYSYHQPVNVVRIFVDKVESIVR
DLQSEATSSESEAILQETARLVHEVFFSTDAYTQERFFIYRHIWSELLHNKEQIREEEKRIDTKMNPLSKALASSHLLFL
NDEDLLAMDLLKKHPASVVSLYFYWLEELLNAMKWDRAKSWLSFTYKQVKTTIQEQENTIFIKDIVRLFVIMYETYATHT
NEQAGLEMILQELLPYSFANYEQYVLAKKQYRTWTELQLLHGFEAIELLKEPLKDIEKEAPEAALPLYHLAATEAIEERN
RKAYRRAVRYLKKLRTLYKRLKRTDEWDAFIIHIANLHSRLRALQEELRKGKLIDDQSN
>Mature_539_residues
MLQHSITKDEIMMIANEFVQGLDPQQTADQEHVATARHLYRSGVVYNVDFDGYTLSGTVDAEGSVYSVHIPIRNVAESYC
DCFAPTQCEHMLAVLLSAASSFGQVGDVLTLFKNNTKPSLPPIRTARQVLQSSAFEETDYKSWQSYFDNEYESFKKEQAR
LTYKQMYFLMSIFTDFYTKLERKAPRIVVIHELFRLHAALYCFQKLLEEIQEFETNKTYSYHQPVNVVRIFVDKVESIVR
DLQSEATSSESEAILQETARLVHEVFFSTDAYTQERFFIYRHIWSELLHNKEQIREEEKRIDTKMNPLSKALASSHLLFL
NDEDLLAMDLLKKHPASVVSLYFYWLEELLNAMKWDRAKSWLSFTYKQVKTTIQEQENTIFIKDIVRLFVIMYETYATHT
NEQAGLEMILQELLPYSFANYEQYVLAKKQYRTWTELQLLHGFEAIELLKEPLKDIEKEAPEAALPLYHLAATEAIEERN
RKAYRRAVRYLKKLRTLYKRLKRTDEWDAFIIHIANLHSRLRALQEELRKGKLIDDQSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007527 [H]

Pfam domain/function: PF04434 SWIM [H]

EC number: NA

Molecular weight: Translated: 63381; Mature: 63381

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQHSITKDEIMMIANEFVQGLDPQQTADQEHVATARHLYRSGVVYNVDFDGYTLSGTVD
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEE
AEGSVYSVHIPIRNVAESYCDCFAPTQCEHMLAVLLSAASSFGQVGDVLTLFKNNTKPSL
CCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPIRTARQVLQSSAFEETDYKSWQSYFDNEYESFKKEQARLTYKQMYFLMSIFTDFYTKL
CHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKAPRIVVIHELFRLHAALYCFQKLLEEIQEFETNKTYSYHQPVNVVRIFVDKVESIVR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
DLQSEATSSESEAILQETARLVHEVFFSTDAYTQERFFIYRHIWSELLHNKEQIREEEKR
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IDTKMNPLSKALASSHLLFLNDEDLLAMDLLKKHPASVVSLYFYWLEELLNAMKWDRAKS
HHHHCCHHHHHHHHCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLSFTYKQVKTTIQEQENTIFIKDIVRLFVIMYETYATHTNEQAGLEMILQELLPYSFAN
HHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCC
YEQYVLAKKQYRTWTELQLLHGFEAIELLKEPLKDIEKEAPEAALPLYHLAATEAIEERN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHH
RKAYRRAVRYLKKLRTLYKRLKRTDEWDAFIIHIANLHSRLRALQEELRKGKLIDDQSN
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLQHSITKDEIMMIANEFVQGLDPQQTADQEHVATARHLYRSGVVYNVDFDGYTLSGTVD
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEE
AEGSVYSVHIPIRNVAESYCDCFAPTQCEHMLAVLLSAASSFGQVGDVLTLFKNNTKPSL
CCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPIRTARQVLQSSAFEETDYKSWQSYFDNEYESFKKEQARLTYKQMYFLMSIFTDFYTKL
CHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKAPRIVVIHELFRLHAALYCFQKLLEEIQEFETNKTYSYHQPVNVVRIFVDKVESIVR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
DLQSEATSSESEAILQETARLVHEVFFSTDAYTQERFFIYRHIWSELLHNKEQIREEEKR
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IDTKMNPLSKALASSHLLFLNDEDLLAMDLLKKHPASVVSLYFYWLEELLNAMKWDRAKS
HHHHCCHHHHHHHHCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLSFTYKQVKTTIQEQENTIFIKDIVRLFVIMYETYATHTNEQAGLEMILQELLPYSFAN
HHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCC
YEQYVLAKKQYRTWTELQLLHGFEAIELLKEPLKDIEKEAPEAALPLYHLAATEAIEERN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHH
RKAYRRAVRYLKKLRTLYKRLKRTDEWDAFIIHIANLHSRLRALQEELRKGKLIDDQSN
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]