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The map label for this gene is ydaJ [H]

Identifier: 227817980

GI number: 227817980

Start: 4946261

End: 4947325

Strand: Reverse

Name: ydaJ [H]

Synonym: BAMEG_5505

Alternate gene names: 227817980

Gene position: 4947325-4946261 (Counterclockwise)

Preceding gene: 227817981

Following gene: 227817978

Centisome position: 94.59

GC content: 35.49

Gene sequence:

>1065_bases
GTGATTGGAGTTATTCTTTTAATCGCTTTAGGTGGAATTGTATTTTGGTCAGCTTTGCAAGGAAACCGTACGGAGCATTT
TATTTTAAGACATATGATGAATGAAAATGGGATGCTTGCTACATATCGTTTAGAAGATACAAAAGCAGGTACCGGTGAAG
CGAAAGGCCGTGAAGCTTTATCGGAATCAGCAGGACTTTGGCTACAATATACATTGGATAAAGATGATCAAGCGTTATTC
GATGAACAAGTTAAGGTTATTCAAAATAACTTTGTACATAAGGACCAAATTGTTTTATGGAAAATCTCTGAAAAGGGAGA
AATGCAATCAGCTACAAATGCACTTATTGACGATCTTCGTATTATAGAACAGTTATATCGCGCTTATGAAATGTACAAGG
AAGAGCGTTATAAAAACTTGGCAGATCAATTGAGTGATGCTGTAATTCGTTATAATAAGAAGGATAATTATTATGTTGAT
TATTATGATGCAGATGCAAGGAAACAAAATGATTTTGCAACAACGTCATATATAAATCCGCGCGCATTCTCTTATATGAA
AAAGTATGGTAAAGTTTCTGCTCAGCAATATCAGGAAGTCGTTCAATTTTTAGCAGATTACCCAAGGCATGGATGGGCAT
TCCCGAAAGAGTATAAAGAAGATGGTACATTTACGTACGATAAAGAAGTGAATCTTATTGACCAATCATACGTTGCATAT
CACCGTAGTTTAGGTGGCCTTTCATCAGATGCTTATTTGGAATTTATAAAGAAGAAGTTCCAGGAGGATGGAAAGTTATA
CGGTCGTTACAATTTAGAAACGGGAAAACAAACCGTGAAGTATGAATCACCAGCCGCTTACGGATTAACAATTTTGTACG
TACTACAAACAGGTGATACAAAGTTTGCAAAGGAATTGTATGACCATATGTCCACATTCCGAAATGACAACGTATTTAGT
AGATATTACGGTGGATACGTAACAGGTGAAAATAATAATACGCATATTTTCGATAACGTACTACCGCTTTTAGCTGAAAT
AGAATTAGAGAAAAGTGAACAATAG

Upstream 100 bases:

>100_bases
TTCCTTTTCGGTGGTTGGCATTTGACTTGGTTCGCCAACAATTTATAGATTTTTATAAGAATTTCAAACCAGGTGAAAAG
TTTGCGGAAACGTATATATA

Downstream 100 bases:

>100_bases
AAGGTGCCACCCTATCGGGATGGCATCTTTTATTTATTGATATCATTTTACGCCTTAATATTGGAGAAGTAATCTATCAC
GAATTCACGGAATTGCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLDKDDQALF
DEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVD
YYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAY
HRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTFRNDNVFS
RYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ

Sequences:

>Translated_354_residues
MIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLDKDDQALF
DEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVD
YYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAY
HRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTFRNDNVFS
RYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
>Mature_354_residues
MIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLDKDDQALF
DEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVD
YYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAY
HRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTFRNDNVFS
RYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41147; Mature: 41147

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREAL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHH
SESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLR
HHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
IIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCEECCCCH
RAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAY
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHH
HRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDT
HHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHCEEEEEEEECCCH
KFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
HHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREAL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHH
SESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLR
HHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
IIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCEECCCCH
RAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAY
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHH
HRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDT
HHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHCEEEEEEEECCCH
KFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
HHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]