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The map label for this gene is ybbI [C]

Identifier: 227817936

GI number: 227817936

Start: 4898772

End: 4899137

Strand: Direct

Name: ybbI [C]

Synonym: BAMEG_5460

Alternate gene names: 227817936

Gene position: 4898772-4899137 (Clockwise)

Preceding gene: 227817935

Following gene: 227817937

Centisome position: 93.66

GC content: 39.07

Gene sequence:

>366_bases
TTGCGAATTGGAGAGTTATCAAAAGAAACTGGCGTTAGTGAGAGATCACTAAGACATTACGAAGAAAAGGGATTACTCCC
TTCTAAGCGCCTCGCAAACGGCTACCGTGATTTTGATGAAAGTGCCATCAAAAAAGTGGAGCTTATTCAAATGTACTTAC
AAATCGGCTTAAATTTAGAAGAGACAGCAAGGATGCTGCGCTGCCTTGAAATAGAGCCACACCTATATGACAATCCGTGC
AGCATCCTTACACTTTACGAAGATAAACTCAATGAAGTAACAAAGCAAATCTCATTGCTTTCCAACATTCAAACGAATTT
GCAAAAACACGTTTCACTCCTAAAACAAGCAAAAGAAAAGGAATGA

Upstream 100 bases:

>100_bases
TCAAGTGTTTTTAAATCATGTGAATTCTTTTGCGAAAAAACAGCATTGACCTTCACATTAGTGTGAAGGTTTACAATGCA
TGTAAAAGGAGTGAAACACA

Downstream 100 bases:

>100_bases
TAACATGTTTGTTATACATGGCAGTTCAAGACAAAACGGAAATACAGAAGCTTTAACACATATGATGATAGAGGGCATTG
AAACAGAACAAATTTACTTG

Product: transcriptional regulator, MerR family

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; MerR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein MerR; Cu(I)-Responsive Transcriptional Regulator; Zn(II)-Responsive Transcriptional Regulator; Mercury Resistance Regulator; Transcriptional Regulator Merr Family; Cd(II)/Pb(II)-Responsive Transcriptional Regulator; Amino Acid Permease

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRIGELSKETGVSERSLRHYEEKGLLPSKRLANGYRDFDESAIKKVELIQMYLQIGLNLEETARMLRCLEIEPHLYDNPC
SILTLYEDKLNEVTKQISLLSNIQTNLQKHVSLLKQAKEKE

Sequences:

>Translated_121_residues
MRIGELSKETGVSERSLRHYEEKGLLPSKRLANGYRDFDESAIKKVELIQMYLQIGLNLEETARMLRCLEIEPHLYDNPC
SILTLYEDKLNEVTKQISLLSNIQTNLQKHVSLLKQAKEKE
>Mature_121_residues
MRIGELSKETGVSERSLRHYEEKGLLPSKRLANGYRDFDESAIKKVELIQMYLQIGLNLEETARMLRCLEIEPHLYDNPC
SILTLYEDKLNEVTKQISLLSNIQTNLQKHVSLLKQAKEKE

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14061; Mature: 14061

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGELSKETGVSERSLRHYEEKGLLPSKRLANGYRDFDESAIKKVELIQMYLQIGLNLE
CCCCCCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ETARMLRCLEIEPHLYDNPCSILTLYEDKLNEVTKQISLLSNIQTNLQKHVSLLKQAKEK
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure
MRIGELSKETGVSERSLRHYEEKGLLPSKRLANGYRDFDESAIKKVELIQMYLQIGLNLE
CCCCCCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ETARMLRCLEIEPHLYDNPCSILTLYEDKLNEVTKQISLLSNIQTNLQKHVSLLKQAKEK
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA