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The map label for this gene is ymfN [C]

Identifier: 227817886

GI number: 227817886

Start: 4852250

End: 4853821

Strand: Direct

Name: ymfN [C]

Synonym: BAMEG_5409

Alternate gene names: 227817886

Gene position: 4852250-4853821 (Clockwise)

Preceding gene: 227817885

Following gene: 227817887

Centisome position: 92.78

GC content: 37.6

Gene sequence:

>1572_bases
ATGAATAAGTCGGTAGCTTATGCAAAAGCTGTGGTTTTCGGTGACATCGTTGCACCTTCACAAGTGAGACAAGCATGTAT
TAATTTCCTACATGAATACTACGTCCTCCAAGACCAAGCTGATTACATATACAAATGGAACACCAAAATAGAAAAGAAAA
TTGATAAAATCATTAAGAATCTTAACTTCGCCCGTGGAGCAAAATCCGCTCAACCTATGTTCCCCAACCTTGCTTTGTTC
CAATGGTTTATCATTCAGAATACATTTTGCTGGGTCTACAAGGAGTTCCCAACCAAACGTAAAATTCGTGAAGTTATTTT
CACTGTAGCTCGTAAAAATGCTAAGTCAGTATTAAGCTGTATCATTCATATCCTAGCATTCTTCCTTGATGAAGCTAACC
AAACGCATTATATCGGTTCAAATACTAAACAACAGGCGACAATCATCTTTGATGAACTTGTAGCGATTATCAAAGCTTCT
CCTAATATGTTGCCATTCTTCAATATCAAGAAGACATATGTAGAATTTACACCAAAGAACTGTAAGATTGTAGCTCTTTC
AGGTGATGCGTCAAAAGCCGATGGAACAATGGTCTACTGCGCTAGCGTCGATGAACTTGGAGCTTCCAATGAAATTTTCA
AAATGGTAAGTTCCTTGGAAACGGGACAATTTGGCCCACGTAATCCTCTCATTATTAAAATTTCTACGTCTTATCCTATC
GAGAATGGGTTCAACTATTGGAATGAAACGGTAGATGCTTTACGTAAAAACACGTTTGCTGACGAGCCTAACCCACGACA
ATTCGGTTTGATATTTACTATTGATAATCCCAAAAAACGCATTCAGTTGAACGGTAGGGACGCTGAACGATGGGAAAACC
CTGAAGTTTGGGCAGAAGCTAATCCGTTGGTTGCTGAAGTTCAAGACCTTGCAGATAAATTGCTCGAAGACTACAAAACT
AAGAAGGATATTCCAAAGGACTTTTTCCTATTTAAAGTTAAAAACTTGAATATGTGGTTAGGAGCCAATGAAGGTGATGG
TAACTTCTTTGTAGATAAACATACTTTACAAAAAAGCTTGTACAAGCCAGCTTCTGATTGGGAATGGTGGAGAGGAAAAC
GTCAGGTGATTATTGGACTCGATTTGTCGTTATCTACAGATAATACAGCTGTTACATTTATGTGGTACGACCAACAAAAT
GAACATCATTATGCTAAAAACCTTGTCTTTTATCCGAAGAATAAGGAAACTGACAAAACCCAGAAAGAACGTATTCCTTA
CGACAAATGGGCACGTGCTGGATACTGTCAACCAATTGGTGAAGATACAGTTGATTATGATGAAATGGCGGATATAATTG
TTGATATTTGCGAGCAATACGATATTCAAATAGGCTCCATTGCATACGACACAAAATACAGTTATACGTTACTAAAACGG
TTAGTTAACGAACTATCAATGGAAGTTGATCCAGTCAAAATCGAACAAGATGCTCGACATTTGGGCAATGCTATTTCATA
CCTTCAAAGAATCATTTATGAAGGTACTTTTTTTATGCCCCAAATCCATTAA

Upstream 100 bases:

>100_bases
ATAGCTAAATTGATGATTGAAGAGAAAAAACTGGAACAGATGAATCAACAAAATAATCAAGCTATCAATCCACTGATGGC
ATTACTGGAGGAGGATGACG

Downstream 100 bases:

>100_bases
TGGAATCAGCTTTTATTAATGGATTAATCGAGTTCAGACAAGGGAAACCATACATTGCAAAATCTGATAAACACCGCAAT
AAGATTGATAACTTGTTTAG

Product: putative prophage LambdaBa03, terminase, large subunit

Products: NA

Alternate protein names: Terminase; Terminase Large Subunit; Phage Terminase; Prophage; Phage Terminase-Like Protein Large Subunit; Phage-Related Terminase Large Subunit; Prophage Lp3 Terminase Large Subunit; Bacteriophage Terminase Large Subunit; Prophage LambdaSa; Phage-Terminase Large Subunit; Terminase-Large Subunit; Phage Related Terminase Large Sub-Unit; Phage Terminase-Like Protein; Phage-Related Terminase; Phage Large Terminase Subunit; Bacteriophage Terminase-Like Protein Large Subunit

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MNKSVAYAKAVVFGDIVAPSQVRQACINFLHEYYVLQDQADYIYKWNTKIEKKIDKIIKNLNFARGAKSAQPMFPNLALF
QWFIIQNTFCWVYKEFPTKRKIREVIFTVARKNAKSVLSCIIHILAFFLDEANQTHYIGSNTKQQATIIFDELVAIIKAS
PNMLPFFNIKKTYVEFTPKNCKIVALSGDASKADGTMVYCASVDELGASNEIFKMVSSLETGQFGPRNPLIIKISTSYPI
ENGFNYWNETVDALRKNTFADEPNPRQFGLIFTIDNPKKRIQLNGRDAERWENPEVWAEANPLVAEVQDLADKLLEDYKT
KKDIPKDFFLFKVKNLNMWLGANEGDGNFFVDKHTLQKSLYKPASDWEWWRGKRQVIIGLDLSLSTDNTAVTFMWYDQQN
EHHYAKNLVFYPKNKETDKTQKERIPYDKWARAGYCQPIGEDTVDYDEMADIIVDICEQYDIQIGSIAYDTKYSYTLLKR
LVNELSMEVDPVKIEQDARHLGNAISYLQRIIYEGTFFMPQIH

Sequences:

>Translated_523_residues
MNKSVAYAKAVVFGDIVAPSQVRQACINFLHEYYVLQDQADYIYKWNTKIEKKIDKIIKNLNFARGAKSAQPMFPNLALF
QWFIIQNTFCWVYKEFPTKRKIREVIFTVARKNAKSVLSCIIHILAFFLDEANQTHYIGSNTKQQATIIFDELVAIIKAS
PNMLPFFNIKKTYVEFTPKNCKIVALSGDASKADGTMVYCASVDELGASNEIFKMVSSLETGQFGPRNPLIIKISTSYPI
ENGFNYWNETVDALRKNTFADEPNPRQFGLIFTIDNPKKRIQLNGRDAERWENPEVWAEANPLVAEVQDLADKLLEDYKT
KKDIPKDFFLFKVKNLNMWLGANEGDGNFFVDKHTLQKSLYKPASDWEWWRGKRQVIIGLDLSLSTDNTAVTFMWYDQQN
EHHYAKNLVFYPKNKETDKTQKERIPYDKWARAGYCQPIGEDTVDYDEMADIIVDICEQYDIQIGSIAYDTKYSYTLLKR
LVNELSMEVDPVKIEQDARHLGNAISYLQRIIYEGTFFMPQIH
>Mature_523_residues
MNKSVAYAKAVVFGDIVAPSQVRQACINFLHEYYVLQDQADYIYKWNTKIEKKIDKIIKNLNFARGAKSAQPMFPNLALF
QWFIIQNTFCWVYKEFPTKRKIREVIFTVARKNAKSVLSCIIHILAFFLDEANQTHYIGSNTKQQATIIFDELVAIIKAS
PNMLPFFNIKKTYVEFTPKNCKIVALSGDASKADGTMVYCASVDELGASNEIFKMVSSLETGQFGPRNPLIIKISTSYPI
ENGFNYWNETVDALRKNTFADEPNPRQFGLIFTIDNPKKRIQLNGRDAERWENPEVWAEANPLVAEVQDLADKLLEDYKT
KKDIPKDFFLFKVKNLNMWLGANEGDGNFFVDKHTLQKSLYKPASDWEWWRGKRQVIIGLDLSLSTDNTAVTFMWYDQQN
EHHYAKNLVFYPKNKETDKTQKERIPYDKWARAGYCQPIGEDTVDYDEMADIIVDICEQYDIQIGSIAYDTKYSYTLLKR
LVNELSMEVDPVKIEQDARHLGNAISYLQRIIYEGTFFMPQIH

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60578; Mature: 60578

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSVAYAKAVVFGDIVAPSQVRQACINFLHEYYVLQDQADYIYKWNTKIEKKIDKIIKN
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHHHHH
LNFARGAKSAQPMFPNLALFQWFIIQNTFCWVYKEFPTKRKIREVIFTVARKNAKSVLSC
CCHHCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHH
IIHILAFFLDEANQTHYIGSNTKQQATIIFDELVAIIKASPNMLPFFNIKKTYVEFTPKN
HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCC
CKIVALSGDASKADGTMVYCASVDELGASNEIFKMVSSLETGQFGPRNPLIIKISTSYPI
CEEEEEECCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
ENGFNYWNETVDALRKNTFADEPNPRQFGLIFTIDNPKKRIQLNGRDAERWENPEVWAEA
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHHCCCCCCEECC
NPLVAEVQDLADKLLEDYKTKKDIPKDFFLFKVKNLNMWLGANEGDGNFFVDKHTLQKSL
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCEEEEHHHHHHHH
YKPASDWEWWRGKRQVIIGLDLSLSTDNTAVTFMWYDQQNEHHYAKNLVFYPKNKETDKT
CCCCCCCHHHCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCHHHCCEEECCCCCCCCCH
QKERIPYDKWARAGYCQPIGEDTVDYDEMADIIVDICEQYDIQIGSIAYDTKYSYTLLKR
HHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECEEEECCCHHHHHHHH
LVNELSMEVDPVKIEQDARHLGNAISYLQRIIYEGTFFMPQIH
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCC
>Mature Secondary Structure
MNKSVAYAKAVVFGDIVAPSQVRQACINFLHEYYVLQDQADYIYKWNTKIEKKIDKIIKN
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHHHHH
LNFARGAKSAQPMFPNLALFQWFIIQNTFCWVYKEFPTKRKIREVIFTVARKNAKSVLSC
CCHHCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHH
IIHILAFFLDEANQTHYIGSNTKQQATIIFDELVAIIKASPNMLPFFNIKKTYVEFTPKN
HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCC
CKIVALSGDASKADGTMVYCASVDELGASNEIFKMVSSLETGQFGPRNPLIIKISTSYPI
CEEEEEECCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
ENGFNYWNETVDALRKNTFADEPNPRQFGLIFTIDNPKKRIQLNGRDAERWENPEVWAEA
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHHCCCCCCEECC
NPLVAEVQDLADKLLEDYKTKKDIPKDFFLFKVKNLNMWLGANEGDGNFFVDKHTLQKSL
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCEEEEHHHHHHHH
YKPASDWEWWRGKRQVIIGLDLSLSTDNTAVTFMWYDQQNEHHYAKNLVFYPKNKETDKT
CCCCCCCHHHCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCHHHCCEEECCCCCCCCCH
QKERIPYDKWARAGYCQPIGEDTVDYDEMADIIVDICEQYDIQIGSIAYDTKYSYTLLKR
HHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECEEEECCCHHHHHHHH
LVNELSMEVDPVKIEQDARHLGNAISYLQRIIYEGTFFMPQIH
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA