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The map label for this gene is yclN [H]

Identifier: 227817860

GI number: 227817860

Start: 4833282

End: 4834124

Strand: Reverse

Name: yclN [H]

Synonym: BAMEG_5381

Alternate gene names: 227817860

Gene position: 4834124-4833282 (Counterclockwise)

Preceding gene: 227817861

Following gene: 227817859

Centisome position: 92.43

GC content: 37.01

Gene sequence:

>843_bases
ATGTTTTTCATAACTCGTGTTCCGAGAACAGTGGCATTAATGCTGACTGGAGCTGCAATGGCGATGGCAGGGCTCGTCAT
GCAACTCATTACACAAAATCGTTTTGTCGAACCTACTACAACGGGAACTATTGAATGGTCAAGCTTAGGCCTGCTTTTTG
TGTATTTACTATTTCCTGCCCCGACTTTAGTTCAAAGAATGACTGGTGCAATCATTTTTTCTTTTATAGGAACTATGATT
TTCTTTCTATTTTTAAGAAGAGTTAAGCTTCGTTCGTCTTTAATTGTCCCGATTATTGGATTGATGCTTGGAGCAGTTAT
TTCTGCAGTATCTACTTTTTTGGGACTCCTTTTTCAAATGACGCAAAGTATTGAAACTTGGTTTGTAGGTTCATTTGCTA
ACATTCAGGTAGGAAGATACGAATATTTATGGCTGATCGTTATCGTTACTTTACTTATTTTTATGTATGCGAATAGATTG
ACTTTAGCTGGACTAGGAGAAGATGTCGCAACAAGTCTTGGAGTTAATTACAATCGAATTGTTCTTTTTGGGACTGCTCT
TATCTCTGTTGCAGTTGGAATTGTTGCAGCTGTTATTGGAAACTTACCTTTCTTAGGGTTAATTGTTCCAAATATTGTTT
CCATGTTTAGAGGTGATGATCTTAGAAGTAATTTACCTTGGGTGTGTGTCATCGGAATGGGGACAATAACTGCCTGTGAC
ATCATTTCTCGAACAATTATAAAGCCTTTTGAATTACCTGTTTCTTTAATACTTGCATCAGTGGGAGCAGTTGTGTTTAT
TACTATTTTATTGAGAAAAAGAAAACCAAGGAGGCTACGATGA

Upstream 100 bases:

>100_bases
AAAACCTTTTATAATAGCGATTATAGTTGTTATAATTTTAGGGATTATATCACTGTTTACTGGAGTTTATGATATACGTG
GACAAGAGGATGGAATGGAG

Downstream 100 bases:

>100_bases
TCACATTAGATTATAGAAATAAAGAAAATGTCGAAGTCGATTCTAGCCTTCATAATGAAAGTAGATCAGCTAGCGCTTTT
CGTTCTAAGAAGGAAGCAAG

Product: iron compound ABC transporter, permease protein

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MFFITRVPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMI
FFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRL
TLAGLGEDVATSLGVNYNRIVLFGTALISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACD
IISRTIIKPFELPVSLILASVGAVVFITILLRKRKPRRLR

Sequences:

>Translated_280_residues
MFFITRVPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMI
FFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRL
TLAGLGEDVATSLGVNYNRIVLFGTALISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACD
IISRTIIKPFELPVSLILASVGAVVFITILLRKRKPRRLR
>Mature_280_residues
MFFITRVPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMI
FFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRL
TLAGLGEDVATSLGVNYNRIVLFGTALISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACD
IISRTIIKPFELPVSLILASVGAVVFITILLRKRKPRRLR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=31.6546762589928, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790740, Length=283, Percent_Identity=28.2685512367491, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=25.089605734767, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786805, Length=278, Percent_Identity=28.4172661870504, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 30816; Mature: 30816

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFITRVPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCC
PTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRI
HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCHH
VLFGTALISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
IISRTIIKPFELPVSLILASVGAVVFITILLRKRKPRRLR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFFITRVPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCC
PTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRI
HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCHH
VLFGTALISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
IISRTIIKPFELPVSLILASVGAVVFITILLRKRKPRRLR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]