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The map label for this gene is 227817855

Identifier: 227817855

GI number: 227817855

Start: 4828883

End: 4829290

Strand: Reverse

Name: 227817855

Synonym: BAMEG_5376

Alternate gene names: NA

Gene position: 4829290-4828883 (Counterclockwise)

Preceding gene: 227817856

Following gene: 227817854

Centisome position: 92.34

GC content: 35.29

Gene sequence:

>408_bases
ATGGAAAGTCAATATAAAGAAGGCGTAATTGATAATGTAGATGGACTTATAAATCAAATTATGAATGAGCACATTCCGCA
GCGACAAAATATTCTTGCACAATATAAAGTGAAAAAAGAGGAATTGCTAAAGGGCGTGCAGTGTGAGGAATGTTTTACAA
TGGCAATGTTAAAAGAAAAACAGGGATGGCGTTGCTCAAACTGTAATAGTACGTCTAAAAGTGCTCATTTACGTGCTTTA
CAAGACTACACACTTCTGTTTGGAACGATAACTACTAATAGTAAATTGAGGGACTTTCTTAATGTGCAGTCTAGTTCTGC
GGTTAAAAGACTCCTCAAAACAATGAACATCCCACACACCGGCACTAATAAAGGGAGAAAATATGATTTAACTTCTTTCC
AATTATAA

Upstream 100 bases:

>100_bases
GTTGTAATTAGTTCTCCTCGTACAATTATTAAAACTTCAGATGAAATGCTTCCTAATAAAATTATCCACGGTGCAAATTT
ACCTAATAGAATCAAAACAA

Downstream 100 bases:

>100_bases
TTTTGCTATAATAAATACGTACTTATACGAAGGGGAGTTTAATGAGAAAATGAAATCATTCAATATTGATCATTTTATCG
CGAGTGTTTTACAGTGGATA

Product: nerd domain protein

Products: NA

Alternate protein names: NERD Domain Protein; Nerd Domain-Containing Protein; NERD Domain-Containing Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMAMLKEKQGWRCSNCNSTSKSAHLRAL
QDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHTGTNKGRKYDLTSFQL

Sequences:

>Translated_135_residues
MESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMAMLKEKQGWRCSNCNSTSKSAHLRAL
QDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHTGTNKGRKYDLTSFQL
>Mature_135_residues
MESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMAMLKEKQGWRCSNCNSTSKSAHLRAL
QDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHTGTNKGRKYDLTSFQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15475; Mature: 15475

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMAMLKEK
CCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
QGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHT
CCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC
GTNKGRKYDLTSFQL
CCCCCCEECCCCCCC
>Mature Secondary Structure
MESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMAMLKEK
CCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
QGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHT
CCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC
GTNKGRKYDLTSFQL
CCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA