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The map label for this gene is yxdM [H]

Identifier: 227817630

GI number: 227817630

Start: 4611806

End: 4613455

Strand: Direct

Name: yxdM [H]

Synonym: BAMEG_5124

Alternate gene names: 227817630

Gene position: 4611806-4613455 (Clockwise)

Preceding gene: 227817628

Following gene: 227817631

Centisome position: 88.18

GC content: 31.88

Gene sequence:

>1650_bases
ATGTTAATCGGTATTTTATCTATCTTTTTCGGCATGCAGTTTGGACTTGTCTTCTCGCAATTTTTCTTATTAGTGACAGC
AAAAATTACGCGCGTACCAGGCATATATTTATACTTGCCTATTAACGCGTTTATTTTAACGACAATCGTCTTCCTTAGTC
TTTTTATCGTTGTATCTACATTGACACCGATGCTCATTCGTACAAAAAAAGCGGTACACCTTTTAAAAATAAATAGTAAA
AAACGAAAAGAAAGAAAACCGTCCATACTTATTTCTTTATTTGGTGCAATTTGTTTATTTGGTGGCTATGCGTTAGCTGG
AAATCCTAAATATTTCGTATCAGTAAGCCCACAAATAGGTGTTATATATATGGTTTCAAGTATTTTCGTCATTCCAACGC
TCGTTACAATCGGTACATATTTCTTTTTTTCACAAATTAGTTTCTTACTTATTTATATTTTAAAGAAAAGAAGAAAGTTT
TATATGAAACAGATTAATATGCTTTGGATTTCTGATTTAGCAAACCGTATTCGAACGAATATTAATATGCTTTTTATTGT
AGCAATGCTATCTACTATCGCTTTCACAATGATTACGTTTCTATATGGGTTCGGAAAGTTTATTAAGCTAGACGTTAATC
GAACTTCTCCTTTCCCAATTTCTTATTTTTCTTATGATGCGAATCCTTTTGTTACAGAGCATTTAAATTGGCTTGAGCAA
CAATTACAAAAAGAGCATTTTCCTTATGAGAAAATAACAGCTGATATATATGAAACACCGCTAGAAGAAGATAAAGGTAT
AGCTATTTATAATGACGTATACGCAATTAAGCAAAGTGACTATAACAAACTTGCGAATTCTTTACGAATGAAACAACTAT
TTATGAATGATAACGAGGCATATGTTTTAACGGGGACGTCTTATATTACTATATTTAATGAATTTGAGCAAAGCTACAAA
AGAGATTACATTACACTCTCTAGTACAAATACGAAATTAAAAGTTAAAGGCTATGAACATATCAATGCAATTCCATCTGA
TTTTTCATATCAAACGATAGTTTTGCCTGATATTATCGTGAACAACTTACCTAACACAGTAAAGCATATATCGGCGTACA
ATTACAAAATTCAAAACTGGGAACAGACGTATAAAATCGCTAATACTTTTATAGAAAAAGTGCAAAAAGATCGAAATAAA
TCTCAGTATGAAGGACCTCTTATTCGATCCTTTGAATCAGCAGGATCGTTATACAGAATAACATCTGGTAGTGCTGCATA
CTTCCTAATCGGAACATTTTTAGGAGTTATTTTCTTCATTGGAGCTGGTAGCGTTCTTTACTTTAGAATGTATACCGATT
TGACGAACGAACAAGAGAAATATATAACGATTTCTAAAATCGGTGTAACAGGTGCAGAGATGAAACGATCTGCAACCATT
CAACTTAGTATTTTATTTTTCGTTCCGTACATTATGGCATCCATTCATACAATGTTCGCAACGAAAATGCTACAAGATGT
AATTGGCTTATCGTTGTTCAAAGAAGTTTCAGCCGTTCTTATTATTTTTGGATTCGTTGAAATCGTATTTTTCTTATTCA
TTCGTTCACTTTATATGCAAAAGCTATCACAATATACTAATACACATTAA

Upstream 100 bases:

>100_bases
CATTGGGACTTTTTTAAAAGTTAGAAAAAAACAATTTGGCGTTTTGACCGTTTTGGGAATATCTAGAAAACAATTACATC
GTCTCGTTTTTATGGAGAAT

Downstream 100 bases:

>100_bases
AAAGGTTATTACATGAAAAAGGCGGGATCTCTTCCCTCCTTTTTCATGCTCATTATATTAGGAGGTTTAGGTGAATGACA
TTTTGGCAGTTTGCATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLIGILSIFFGMQFGLVFSQFFLLVTAKITRVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAVHLLKINSK
KRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKF
YMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQ
QLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEAYVLTGTSYITIFNEFEQSYK
RDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNLPNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNK
SQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATI
QLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH

Sequences:

>Translated_549_residues
MLIGILSIFFGMQFGLVFSQFFLLVTAKITRVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAVHLLKINSK
KRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKF
YMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQ
QLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEAYVLTGTSYITIFNEFEQSYK
RDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNLPNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNK
SQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATI
QLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH
>Mature_549_residues
MLIGILSIFFGMQFGLVFSQFFLLVTAKITRVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAVHLLKINSK
KRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKF
YMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQ
QLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEAYVLTGTSYITIFNEFEQSYK
RDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNLPNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNK
SQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATI
QLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 63233; Mature: 63233

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGILSIFFGMQFGLVFSQFFLLVTAKITRVPGIYLYLPINAFILTTIVFLSLFIVVST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIG
HHHHHHHHHHHHEEEEECCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCC
VIYMVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
INMLFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHH
QLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEA
HHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCCCCE
YVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIV
EEEECCCEEEHHHHHHHHHCCCEEEEECCCCEEEEECCHHHCCCCCCCCEEEEEEHHHHH
NNLPNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRI
HCCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEE
TSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATI
ECCCHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCCCEEEEEECCCCHHHHCCCCEE
QLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQ
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSQYTNTH
HHHHHCCCC
>Mature Secondary Structure
MLIGILSIFFGMQFGLVFSQFFLLVTAKITRVPGIYLYLPINAFILTTIVFLSLFIVVST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIG
HHHHHHHHHHHHEEEEECCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCC
VIYMVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
INMLFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHH
QLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEA
HHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCCCCE
YVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIV
EEEECCCEEEHHHHHHHHHCCCEEEEECCCCEEEEECCHHHCCCCCCCCEEEEEEHHHHH
NNLPNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRI
HCCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEE
TSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATI
ECCCHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCCCEEEEEECCCCHHHHCCCCEE
QLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQ
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSQYTNTH
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]