Click here to switch to the map view.

The map label for this gene is ytoI [H]

Identifier: 227817397

GI number: 227817397

Start: 4421435

End: 4422337

Strand: Reverse

Name: ytoI [H]

Synonym: BAMEG_4889

Alternate gene names: 227817397

Gene position: 4422337-4421435 (Counterclockwise)

Preceding gene: 227817398

Following gene: 227817396

Centisome position: 84.56

GC content: 36.99

Gene sequence:

>903_bases
GTGTTAATTACGGGCGGATTTGATACGGAAGATCATGTGAAGAAATTAGCAGATGAATTAAAACTGCCGATTATTTCAAG
TAGTTACGATACATTTACAGTTGCAACGTTAATTAACCGTGCGATTTACGATCAGCTTATTAAGAAAGAAATTGTACTCG
TTGAAGATATTTTAACGCCAATTGAAGAGACGTTATATTTAAAACCAAATGATACAGTGCAGCAATGGCATGCATATAAC
GAAGAGACGATGCACGGAAGGTATCCAATTGTTGATGAAAATAAAAAGGTATTAGGTATTGTGACTTCTAAGGATATGAT
TGGTGTTGCAAAAGAAACACCAATTGATAAGGTAATGACAAGGCATCCAATTACGGTAAATGGCAAAATGTCTGTCGCAG
CTGCGGCACGTATGATGGTGTGGGAAGGTATTGAGTTACTTCCTGTTGTTGATGAAGGAAATAAGTTGCAAGGTATTATT
AGCCGTCAAGATGTACTTCAGGCGTTGCAAATGATTCAGCGTCAACCGCAAGTAGGCGAAACAATCGATGATATTGTAAC
GAATCAATTTATGACGCCGAAAGAAGCGAAAAATGAGCATTTATATCAATTTTCAGTGACGCCGCAAATGACGAATTCAA
TCGGAACGCTATCTTACGGTGTATTCGCAACGATTGTGACAGAAGCAACGAATCGCGTTATTCGTGCGCAAAAGAAGAGT
GATTTAATTGTTGAGAACTTAACAATTTATTTCGTAAAACCAGTTCAAATTGACAATGTTGTATCGGTTCATCCGAAAGT
ATTAGAAATTGGACGTAAATTTGGTAAGGTTGATGTAGAGGTGCATCATGAAGGTAATGTTGTTGGAAAAGCATTACTTA
TGGTGCAGTTAATTGATAAATAA

Upstream 100 bases:

>100_bases
CGCAATGAAATTAGAAGCGATGATGCGCTAAGCTGGAAACTTACTTATTGTCGGTAATCGTACGAACGCACATCAATTAG
CGTTAGAAACCGGAGCTGCG

Downstream 100 bases:

>100_bases
AAAGATGGAGCAGACCGCTTTGGTTTGTTCCATTTTTTTTAGAACGCTACATTAGAGGGTTTTAAAATTTAGTTATCGAA
TGTATTATATTTTGAATTGC

Product: CBS domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLITGGFDTEDHVKKLADELKLPIISSSYDTFTVATLINRAIYDQLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYN
EETMHGRYPIVDENKKVLGIVTSKDMIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII
SRQDVLQALQMIQRQPQVGETIDDIVTNQFMTPKEAKNEHLYQFSVTPQMTNSIGTLSYGVFATIVTEATNRVIRAQKKS
DLIVENLTIYFVKPVQIDNVVSVHPKVLEIGRKFGKVDVEVHHEGNVVGKALLMVQLIDK

Sequences:

>Translated_300_residues
MLITGGFDTEDHVKKLADELKLPIISSSYDTFTVATLINRAIYDQLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYN
EETMHGRYPIVDENKKVLGIVTSKDMIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII
SRQDVLQALQMIQRQPQVGETIDDIVTNQFMTPKEAKNEHLYQFSVTPQMTNSIGTLSYGVFATIVTEATNRVIRAQKKS
DLIVENLTIYFVKPVQIDNVVSVHPKVLEIGRKFGKVDVEVHHEGNVVGKALLMVQLIDK
>Mature_300_residues
MLITGGFDTEDHVKKLADELKLPIISSSYDTFTVATLINRAIYDQLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYN
EETMHGRYPIVDENKKVLGIVTSKDMIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII
SRQDVLQALQMIQRQPQVGETIDDIVTNQFMTPKEAKNEHLYQFSVTPQMTNSIGTLSYGVFATIVTEATNRVIRAQKKS
DLIVENLTIYFVKPVQIDNVVSVHPKVLEIGRKFGKVDVEVHHEGNVVGKALLMVQLIDK

Specific function: Unknown

COG id: COG4109

COG function: function code K; Predicted transcriptional regulator containing CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR010766
- InterPro:   IPR000524
- InterPro:   IPR006683
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03061 4HBT; PF00571 CBS; PF07085 DRTGG; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 33719; Mature: 33719

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITGGFDTEDHVKKLADELKLPIISSSYDTFTVATLINRAIYDQLIKKEIVLVEDILTP
CEEECCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSKDMIGVAKETPIDKVMT
HHHEEEECCCCHHHHHHCCCCCCCCCCCCEECCCCEEEEEEECCCHHCCCCCCCHHHHHH
RHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGIISRQDVLQALQMIQRQPQVGE
CCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
TIDDIVTNQFMTPKEAKNEHLYQFSVTPQMTNSIGTLSYGVFATIVTEATNRVIRAQKKS
HHHHHHHHCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DLIVENLTIYFVKPVQIDNVVSVHPKVLEIGRKFGKVDVEVHHEGNVVGKALLMVQLIDK
CEEEEEEEEEEEECEEECCEEECCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLITGGFDTEDHVKKLADELKLPIISSSYDTFTVATLINRAIYDQLIKKEIVLVEDILTP
CEEECCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSKDMIGVAKETPIDKVMT
HHHEEEECCCCHHHHHHCCCCCCCCCCCCEECCCCEEEEEEECCCHHCCCCCCCHHHHHH
RHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGIISRQDVLQALQMIQRQPQVGE
CCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
TIDDIVTNQFMTPKEAKNEHLYQFSVTPQMTNSIGTLSYGVFATIVTEATNRVIRAQKKS
HHHHHHHHCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DLIVENLTIYFVKPVQIDNVVSVHPKVLEIGRKFGKVDVEVHHEGNVVGKALLMVQLIDK
CEEEEEEEEEEEECEEECCEEECCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]